Pantoea ananatis LMG 20103: PANA_3079
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Entry
PANA_3079 CDS
T01195
Symbol
rumA
Name
(GenBank) RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pam
Pantoea ananatis LMG 20103
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pam03009
]
PANA_3079 (rumA)
Enzymes [BR:
pam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PANA_3079 (rumA)
Ribosome biogenesis [BR:
pam03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PANA_3079 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
PCMT
RrnaAD
Methyltransf_25
MTS
Cons_hypoth95
Methyltransf_23
Met_10
DOT1
Ribosomal_L22
Methyltransf_4
PDGF
ExoU_C
DUF4770
Motif
Other DBs
NCBI-ProteinID:
ADD78246
UniProt:
D4GLJ3
LinkDB
All DBs
Position
complement(3453037..3454440)
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AA seq
467 aa
AA seq
DB search
MAQFYSAKQRVTTQQRITVTIEDLDPFGQGVARYKGKTLFVSGALPGEQAEVTLLEDKRQ
YARAKAVRLLNHSPSRVAPRCPHFSRCGGCQQQHADEALQQQSKSRALARMLTQAANQPV
AVDEIIAGPAWGYRRRVRLGLQWQNKTQQLLMGFRQAATNDLVDIQQCPIMVPQLEALII
PLRNCLTMLNAVKRLGHVELVLADNGPVLLLRHLDALSSDDIAKLERFSHQHQLMLFLDD
GSETLRASGDRQPFYHSHQLELIFSPKDFIQVNDTVNQQMVAKAIAWLDLQPEDRVLDLF
CGMGNFTLPVGKSVQSAVGVEGVAALVQQAEYNADVNALKNVKFFQHNLEEDVSRQPWAM
QGFNKVLLDPARAGAAGVMAHVVKLSPECVVYVSCNPVTLARDSETLLSAGYQLERVAML
DMFPHTRHLESMVLFRKKYKCPAGALCRRGYGCGQKCAFKYGRGVCP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattttactccgcaaaacagcgtgtgacgacccaacaacggatcaccgtcacc
attgaagacctcgacccgtttggtcagggcgttgcccgctacaagggcaaaaccctgttt
gtctcgggcgcgctgcccggagagcaggctgaggtcaccctgctggaggataaacgccag
tatgccagagcgaaagcggtgcgcctgcttaaccacagtccttcacgggttgcgccgcgc
tgtccccattttagccgctgtggaggttgtcagcagcagcatgccgacgaggcgttacaa
cagcaaagtaaatcacgtgcgctggcacggatgttgacccaggcagcgaaccagccggtg
gcggttgatgagatcattgccggaccggcctggggctaccgtcgccgcgtcaggcttggc
ctgcagtggcagaacaaaacacagcagttgctgatggggtttcgccaggcggccaccaac
gatctcgtcgatatccagcagtgccccatcatggtgccccagcttgaagcgctgattatt
ccgctgcgcaattgtctcactatgcttaatgctgtcaaacgcttaggtcatgttgagctg
gtgctggctgacaacggcccggtgctgttattgcgccatctcgatgcattaagtagcgat
gatattgcaaaactggaacgtttttcgcatcagcaccaactgatgctgtttctggatgat
ggaagcgagacgctgcgcgcatctggcgatcggcagccgttttatcattctcaccagctt
gagctaatcttcagtccaaaggattttattcaggtcaacgatacggtgaatcagcagatg
gtggcgaaggccattgcgtggctggatttgcaacctgaagatcgggtgctggatctgttt
tgcggcatgggaaactttacgcttcctgtaggaaaatcggtacaaagtgccgtgggtgtg
gagggcgttgcagcattagtgcagcaggcagagtataatgctgacgtgaatgcgctaaaa
aacgtcaaattcttccagcataatctggaagaagatgtttcgcgccagccctgggctatg
cagggatttaacaaggtattactcgatccggctcgcgctggggcggcaggtgtcatggca
catgtcgtcaaattatcgccagaatgcgtggtctatgtttcgtgtaatcctgtgacactc
gcacgtgacagtgaaacattgctgtcagcgggttaccaattggaaagggtcgcgatgctg
gatatgtttcctcatacccgtcatctcgaatccatggtgctgttcagaaaaaaatataag
tgtccggcaggggcgctgtgcaggagaggatatggttgcggtcagaagtgcgcatttaaa
tacggaaggggagtttgcccttga
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