Pantoea ananatis LMG 20103: PANA_3109
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Entry
PANA_3109 CDS
T01195
Symbol
recC
Name
(GenBank) RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pam
Pantoea ananatis LMG 20103
Pathway
pam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PANA_3109 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pam03400
]
PANA_3109 (recC)
Enzymes [BR:
pam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PANA_3109 (recC)
DNA repair and recombination proteins [BR:
pam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PANA_3109 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ADD78276
UniProt:
D4GLM3
LinkDB
All DBs
Position
complement(3492617..3495994)
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AA seq
1125 aa
AA seq
DB search
MFHVYHSNQLDLLKSLAARVIKLDPLDDPFASEMVLVQSPGMAQWLQMELAHTFGIAANI
EFPLPASFIWEMFVRVLPDIPVESAFSKASMSWKLMHRLPSLLLQDEFASLRHYLSDDGD
KRKLFQLSARVADLFDQYLVYRADWLNSWERGQHIDGLGDAQIWQAALWRDLVNYTEELG
QPKWHRANLYARFIHTLEQTQTPPANLPERVFICGISALPPVYLQALQALGRHIDIYLLF
TNPCRDYWGDIQDYAFLAKLQSRQRRRHDREEYRGLFSDVARAPALFSDEGEQQLTNPLL
ASWGKLGRDNLYLLSQMDLNSEIDAFVDVEEDNLLHSMQHDLLNLQDKAVIGLTADELAY
SGQKRCLDPADRSIAIQVCHSAQREVEVLQDHLLARMEADPGLKARDIIVMVADIDAYAP
FIQAVFANAPAERYLPFAISDRRASQAHPAIVAFLHLLALPDSRFVSEDVLALLDVPALA
NHFSIDESGLRLLRRWVSESGVRWGLDDASVEALALPVTGQHTWRFGLQRMLLGYAMESQ
HGDWQGILPYDESSGLVAELAGHLAELLSRLNHWRQVLSEPRPLEAWLPLCRELLNAFFT
ADPETEAALLLVEEQWKALIEYGMDARFDEPIPVVLLRDDLRGRLDQQRISQRFLAGQIN
FCTLMPMRSIPFSVVCLLGMNDGVYPRTLAPLGFDLMQQQSRKGDRSRRDDDRYLFLEAL
ISAQQQLYISYIGRAIQDNTERYPSVLVTELLEYIGQSFYLPGDEDQDLDESARRVRSHL
EHLHSRMPFAPENFQPASAAHSFAREWLPAARGTGQPQPDFVQPLLTLPVETLALEQFLR
FWRHPVRAWFQQRLGVSFWLEENELPDSEPFALDSLERYQINAQLLNALVTGEDTDRLYA
HHRAAGNLPYGAFGELFWQAQREEMQEVAADVTSQRSEGESWEINLDLDGVSLSGWLTQV
QSDGLLRWRPGVLNINDGLLLWLEHLVYCALGGNGRSRMFGRQQSYWCFHAVAPDDATAQ
LARYMQGYLQGMREPLMLLTKSGGAWISTCFDKKSHQFLSDEATQLKARNNLLAAWVGGY
QQEGEGSDPYLQRLCRVLDESQLQRITEAAACWYSPVLQAHQDDR
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacgtttatcactctaatcagcttgatctgctcaaaagcctggcagccagagtg
attaaactggatccgcttgacgatccttttgcctcagaaatggtgctggtacaaagtccg
ggcatggcgcaatggttacagatggagctggcgcacacctttggcattgcggcgaatatt
gaatttccgctaccggccagttttatctgggaaatgtttgttcgcgtactgccggacatt
ccggtcgaaagcgcttttagcaaagccagcatgagctggaagctgatgcaccgtttaccc
tcgctgctgctacaggatgagtttgcctcactgcgccattacctgagcgatgatggtgac
aagcgcaaactgtttcagctcagtgcccgcgtcgctgacctgtttgaccagtatctggtt
tatcgcgccgactggctgaacagttgggagcggggtcagcacatcgacggcctgggcgat
gcccagatttggcaggcggcgctatggcgtgacttagtgaattacaccgaggaactgggc
cagcctaaatggcaccgtgccaacctctatgcgcgctttatccatacgctggagcagacg
cagaccccaccagccaacctgcccgaacgggtttttatttgcggcatatcagcgcttccg
ccggtctaccttcaggcgttacaggcgctggggcgacatatcgatatctatctgctgttc
acgaatccctgccgcgactactggggcgacattcaggattatgcttttctggcgaagtta
caaagccgtcagcgtcgccgccacgatcgggaggagtatcgtggattgtttagcgatgtg
gcgcgtgcgcctgcgctgttcagtgacgaaggcgagcagcagctcacgaacccgctcctg
gcctcctggggcaagctggggcgcgataacctttacctgctcagccagatggatcttaac
agcgaaattgacgcctttgtcgatgtagaggaagacaacctgctgcacagcatgcagcac
gatcttctcaatctgcaggacaaggccgtgatcggtctgacggccgacgaactggcctac
agtgggcaaaagcgttgtctggatccagcggatcgatccatcgccatacaggtttgtcac
agtgcccaacgcgaagtggaagtgttgcaggatcatttactggcgcggatggaggcggat
cccgggctaaaagcacgcgatatcattgtcatggtcgccgacattgacgcctatgcgccc
tttattcaggccgtgtttgctaatgctccggccgaacgttatctgccgtttgccatctct
gaccgccgtgccagtcaggcgcatccagcgattgtggcttttctgcatttactggcgctg
cccgacagccgtttcgtctccgaagatgtgctggcgctgctggacgtgcccgccttagcg
aaccacttctcgattgacgaaagcgggctgcgtttactgcggcgctgggtgagcgaatcg
ggcgtacgctgggggctggatgatgccagcgttgaggcactggccctgccggttaccggt
cagcatacctggcgctttgggctgcaacgcatgctgcttggctatgcgatggaaagccag
catggcgactggcagggcatcctgccctacgatgagtcaagtggactggtggccgaactg
gcaggtcatctggctgagctgctgtcgcggctcaaccactggcgtcaggtgctgtccgaa
ccgcgcccgctggaagcgtggctgcctttgtgccgcgagctgctcaatgcattctttacg
gccgatcccgaaactgaagctgcactgctgctggtggaagagcagtggaaggcgttgatt
gaatacggcatggacgcacgcttcgatgagcccattccggtggtgttgctgcgcgacgat
ctgcgcggccgactggaccagcagcgtatcagtcagcgttttctcgccggacaaatcaac
ttttgtaccctgatgccaatgcgttccatcccgtttagcgtcgtgtgtttactggggatg
aacgatggcgtttatccgcgtaccctggcgccgctgggatttgacctgatgcaacagcag
tcgcgtaaaggggaccgtagccgccgtgatgacgaccgttacctgtttctggaggccctg
atctccgcgcagcaacagctctatatcagctatatcggacgcgcgatacaggacaatacc
gaacgttatccgtccgtgctggtcacagaattactggaatatattgggcaaagtttttat
ctgccaggcgatgaagaccaggatctggacgagagcgcgcgccgggtcaggtcgcatctg
gaacacttgcacagccggatgccgttcgcgcccgagaactttcagcccgcgtcggcagcc
cacagttttgcccgcgaatggcttcccgccgcgcggggtacgggtcagccccagcccgat
ttcgttcagcccctgctcacgctgcccgtagagacattagcccttgaacagttcctgcga
ttctggcgtcatcccgtgcgggcctggtttcagcaacgcctgggcgtgagtttctggctt
gaagaaaatgaactccccgacagcgaaccctttgcgctggatagcctggagcgttaccag
attaatgcccaactgctgaatgcactggtaacaggcgaggacaccgatcgtctttatgcc
catcaccgcgctgccggaaacttaccttacggcgcgtttggtgaactgttctggcaggct
cagcgtgaagagatgcaggaggtggcggcagacgtcacctctcaacgtagcgaaggggaa
agctgggaaatcaatctggatctggacggcgtcagcctgtccggctggctgactcaggtg
cagagtgacgggctactgcgctggcggccaggcgtgctgaatatcaatgatggtttatta
ctgtggctcgaacatttagtttattgtgcactgggcggtaacggcagaagccgcatgttt
ggccgccagcagagctactggtgcttccacgccgttgcgccggatgacgccacggcccag
ttagcgcgctacatgcaaggttatctgcaaggaatgcgcgaacccttgatgctcctgact
aaaagcgggggcgcctggatcagcacctgttttgataagaaaagccatcagttcctcagt
gatgaggccacgcagctcaaagcccgcaacaatttgctggcggcctgggtgggggggtat
cagcaggagggcgagggaagcgatccctatttgcagcggctgtgcagagtactggacgaa
tcccagctacagcgcataaccgaggcggcggcgtgctggtactcaccggtgctgcaggcc
catcaggacgatcggtaa
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