Pantoea ananatis LMG 20103: PANA_3238
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Entry
PANA_3238 CDS
T01195
Symbol
speC
Name
(GenBank) SpeC
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pam
Pantoea ananatis LMG 20103
Pathway
pam00330
Arginine and proline metabolism
pam00480
Glutathione metabolism
pam01100
Metabolic pathways
pam01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PANA_3238 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PANA_3238 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
PANA_3238 (speC)
Enzymes [BR:
pam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
PANA_3238 (speC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ADD78405
UniProt:
D4GMD7
LinkDB
All DBs
Position
complement(3613072..3615222)
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AA seq
716 aa
AA seq
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MTPLKIAASAAVAPNLTLNTARDVVTLDNTDFTDVAAVVVSLADTRSGVLALLRHTGFNL
PVFVANAFEEEVMHLPGVTGELNGEPQDWVALEAAAQAYEAALLPPFFETLTRYVDMQNS
TFACPGHQGGAFFKKHPAGKQFFDFYGENVFRSDMCNADVKLGDLLIHEGSAKHAQKFAA
KVFNADKTYFVLNGTSSANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEA
ARNPFGFIGGIDAHCFDDGYLREQIKKVAPERANEARPFRLAIIQLGTYDGTVYNARQVV
DRIGHLCDYILFDSAWLGYEQFIPLMEGCSPLTLELNENDPGIFVTQSVHKQLAGFSQTS
QIHKKDNHIRGQKRFCPHKRLNNAFMLHASTSPFYPLFAALDINAKMHQGEAGRRMWDEC
VMLGIEARKAIFDRCDMILPFVPERVNGQRWQDAPTESIARDLQYFSFEPNAKWHGFAGY
DRDQYRVDPCKLLLTTPGIDAASGEYAEFGIPATILANYLRENGIVPEKCDLNSILFLLT
PAESPEKMAMLVAMLAQFEQHVKDDTLLAEVLPTLYRKNAKRYAGYTLRRLCQEMHDLYV
SYNVKDLQRMMFREQGLPQVKVNPQDAHQAYIRGEVELVPIATAEGRIAAEGALPYPPGV
LCVVPGETWGGAVQRYFLALEAGINQLPGFSPELQGVYTEEGADGRKYLVANMMVG
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgacaccactgaaaattgctgccagcgctgctgttgcgcctaacctgaccttgaatact
gcgcgcgacgtggtcacgctggataatactgattttaccgatgtggcggctgttgtcgtc
tcgctggctgatacgcgcagtggcgtgctggcgttgttacgccacacgggttttaattta
ccggtgttcgttgctaatgcctttgaagaagaggtgatgcacctgcctggcgtgaccggc
gaactgaatggcgagccgcaggactgggtagcgctggaagcggcggctcaggcttatgaa
gccgcgctgctgccccctttttttgaaacgctgacccgctatgttgatatgcagaacagc
acctttgcctgtccgggccatcagggcggcgcatttttcaaaaagcacccagcgggtaag
caattttttgatttctatggcgagaacgtttttcgttcggacatgtgtaacgctgacgtc
aagctgggcgacctgctgattcatgaggggtcggctaagcatgcgcaaaagtttgccgcc
aaagtgtttaacgcggataaaacctactttgtgttaaatggcacgtcaagcgcgaacaaa
gtggtcaccaatgcgctgctgacgcgcggtgatttagtgctgtttgaccgcaataatcac
aagtccaaccatcatggtgcgctgattcaggcgggcgcgacgccggtttaccttgaagcg
gcccgtaatccgtttggcttcatcggcggcattgatgcgcactgtttcgatgatggctac
ctgcgcgaacagatcaagaaagtggcacctgaaagggctaacgaggcgcgtcccttccgg
ctggcgattatccagttgggcacctacgacggcacggtatacaacgcgcggcaggtggtg
gatcgcattgggcatctgtgtgactacattctgtttgactcggcctggctgggctatgag
cagtttattccgctgatggaaggctgttctccactgacgctggagttgaacgaaaacgat
cccggcatttttgttacccagtcagtgcacaagcagctggcgggcttttcgcagacctcc
cagatccacaagaaagataaccatattcgtgggcaaaagcgtttctgcccgcataagcgc
ctgaacaacgcgttcatgctgcacgcttcaaccagcccgttctatccgctgtttgccgcg
ctggatattaacgccaaaatgcatcagggcgaggcgggacgccgcatgtgggatgagtgc
gtgatgctggggatcgaggcacgtaaagcgatctttgatcgttgtgacatgatcctgcct
ttcgtgccggaaagggtaaacgggcaacgctggcaggatgcaccaacggaatcgatcgct
cgcgatctgcagtatttcagctttgaacccaacgctaaatggcacggtttcgccggatac
gatcgcgatcagtaccgtgtcgatccctgcaagctgttgctgaccacgccaggcattgac
gcagccagcggtgaatatgctgagtttggcatcccggcgaccattctggcgaattacctg
cgtgaaaacggcatcgtgccggaaaaatgcgatctcaattctattctgttcctgctgact
ccagccgaaagtccggaaaaaatggcgatgctggtggcgatgctggcgcagttcgagcag
catgtaaaagacgatacgctgctggccgaagtgttgccgacgctgtaccgcaaaaacgct
aaacgctatgcgggttataccttgcgccgtctgtgtcaggagatgcacgacctgtacgta
agctataacgtaaaagacctgcagcgcatgatgttccgcgagcaggggctgccgcaggtt
aaggtgaacccacaggatgcgcatcaggcttacattcgtggcgaagtcgaactggtacct
attgcaacggcagaaggtcgcatcgcggcggaaggcgctctgccttatccaccgggcgtc
ctttgtgtggttccgggcgaaacatggggcggggcggtacagcgctattttctggcgctg
gaagcgggtatcaatcaactgcccggtttttcgccggagctgcaaggggtttacaccgag
gaaggcgctgacggacgtaagtatctggtagcgaatatgatggtgggttga
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