Pantoea ananatis LMG 20103: PANA_3537
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Entry
PANA_3537 CDS
T01195
Symbol
hfq
Name
(GenBank) Hfq
KO
K03666
host factor-I protein
Organism
pam
Pantoea ananatis LMG 20103
Pathway
pam02024
Quorum sensing
pam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PANA_3537 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PANA_3537 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pam03019
]
PANA_3537 (hfq)
03036 Chromosome and associated proteins [BR:
pam03036
]
PANA_3537 (hfq)
Messenger RNA biogenesis [BR:
pam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PANA_3537 (hfq)
Chromosome and associated proteins [BR:
pam03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PANA_3537 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Herpes_capsid
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ADD78704
UniProt:
D4GNZ9
LinkDB
All DBs
Position
complement(3934263..3934577)
Genome browser
AA seq
104 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNTGGGSSNNYHHGGSSTSAQSQPQQDGDNAE
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatcattacaagacccgtttctgaacgcactgcgtcgtgaacgtgtt
ccggtttcgatttatttggttaacggtattaagctgcaaggtcagatcgaatcctttgat
cagttcgtgatcttgttgaaaaacacggtaagtcagatggtttataagcacgccatttct
accgtcgtgccttcacgcccggtttctcaccatagcaacaataccggcggtggcagcagc
aacaattaccatcatggcggcagcagcacttctgcgcagtcgcagccacaacaagacggt
gataacgcagagtaa
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