Pantoea ananatis LMG 20103: PANA_3722
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Entry
PANA_3722 CDS
T01195
Symbol
rpoH
Name
(GenBank) RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pam
Pantoea ananatis LMG 20103
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pam03021
]
PANA_3722 (rpoH)
Transcription machinery [BR:
pam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PANA_3722 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
HTH_3
HTH_AsnC-type
UCR_14kD
Rv2175c_wHTH
SANT_DAMP1_like
HTH_25
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
ADD78889
UniProt:
D4GD64
LinkDB
All DBs
Position
complement(4119260..4120117)
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AA seq
285 aa
AA seq
DB search
MTKEMQTLAIAPLGNLESYVRAANTWPMLSAEEEKALAERLHYQGDLDAAKTLILSHLRF
VVHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM
TFDMSADDESGEGKSMAPVLYLQDKTSDFADGIEEDNWESHAADKLTYAMEGLDERSQHI
IRARWLDEDNKTTLQELADRYGVSAERVRQLEKNAMKKLRMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagctattgctcctctgggcaacctggaatcttacgtt
cgggctgccaacacctggccgatgctgtcggcagaagaggaaaaggcgttggctgaacgg
ctgcattaccagggcgatctggatgcggctaagacgctgatcctgtctcacctacgcttt
gttgttcatatcgctcgtaactattcaggttacggcctgcctcaggctgacctgattcag
gaaggtaacatcggcttgatgaaagccgttcgtcgctttaatcctgaagttggcgtccgt
ctggtatcctttgccgtgcactggattaaagcggaaattcacgaatatgtgctgcgtaac
tggcgcatcgtgaaagtggcgaccacgaaagcacagcgcaagctgttctttaacctgcgt
aaaaccaagcagcgcctgggctggtttaatcaggacgaagtagaaatggtcgcgcgcgag
ctgggcgtgagcagcaaagatgtgcgggaaatggaatcgcgcatggccgcgcaggatatg
accttcgatatgtccgctgatgatgaaagcggtgaaggtaaatccatggcgccggtgctg
tatctccaggataaaacctctgattttgccgacggtatcgaagaggataactgggagtca
catgcagccgacaagctgacgtacgcaatggaaggcctggacgagcgcagccagcatatc
attcgcgcccgctggctggatgaggacaacaaaactacactgcaggaactggccgatcgt
tatggcgtttccgcagagcgcgtccgacagcttgaaaagaacgcgatgaagaaactccga
atggctatcgaagcctga
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