Pantoea ananatis LMG 20103: PANA_4032
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Entry
PANA_4032 CDS
T01195
Symbol
ycdC
Name
(GenBank) YcdC
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pam
Pantoea ananatis LMG 20103
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pam03000
]
PANA_4032 (ycdC)
Transcription factors [BR:
pam03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PANA_4032 (ycdC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
ADD79199
UniProt:
D4GEU3
LinkDB
All DBs
Position
complement(4472843..4473646)
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AA seq
267 aa
AA seq
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MVVLGCHQVVFLNNAYDDSRLNAYLLCFWPCCVYQGNVVKPLSENPGSDAGENLAAKTPS
KSVTRRSRAVAAKRGAIMAAALEFFSLYGFHGTRLEQVAERADVSKTNLFYYFPSKEDLY
IAVLKGLLDIWLAPLKALQSDQHPLEAIREYIRLKLCVSRDHPQASRLFCLEMVQGAPLL
KQELGGSLKTLVEDKSDVIRGWIKDELIAPIDPMQLIFMLWATTQHYADFGVQVEAITGK
TLSDPVFFEQTVKSVQHIITEGIQIRA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttggttgtgctgggttgtcatcaggttgtgtttttaaataacgcgtatgacgatagtcgc
cttaatgcctatttgttatgcttttggccttgttgtgtgtatcagggaaatgttgtgaag
ccattgtccgaaaacccgggttctgacgccggagaaaacctcgccgcgaaaacgccatcg
aaatctgtgacgcgacgttcgcgagcggttgctgccaaacgtggcgctatcatggccgct
gcactggaattcttctcactgtatggctttcacggcacccgtcttgagcaggttgctgaa
cgcgcggatgtctcgaaaaccaatctgttctactactttccctcgaaagaagatttatac
attgcggtgctcaaagggctgctggatatctggctggcaccgcttaaagcactgcagtcc
gatcagcatcctctggaagcaatacgggaatatattcgtctgaagctttgcgtctcccgt
gaccatcctcaggcctcaagattattttgtctggagatggttcagggcgcaccgctgctg
aaacaggagctgggcggcagcctgaaaacgctggtggaggataaatcggacgtgattcgc
ggctggattaaagatgagttgatcgcacccatcgatccgatgcagttgatttttatgctg
tgggccaccactcagcattacgcagattttggggtacaggttgaggcgattaccggtaaa
acactcagcgatcctgtgttttttgaacaaacggtgaagagtgtccagcacatcatcacc
gaagggattcagattcgggcgtaa
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