Periplaneta americana (American cockroach): 138690946
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Entry
138690946 CDS
T10946
Symbol
skd
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
pame
Periplaneta americana (American cockroach)
Brite
KEGG Orthology (KO) [BR:
pame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pame03021
]
138690946 (skd)
Transcription machinery [BR:
pame03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
138690946 (skd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
138690946
NCBI-ProteinID:
XP_069668635
LinkDB
All DBs
Position
16:complement(7398420..7666028)
Genome browser
AA seq
2353 aa
AA seq
DB search
MTHPNHQTNGASLEDCHTNFFALTDLCGIKWRKLVCGDYNFSSEPLDDPVLASFSRCLAG
DILCVWRRVATQQPASATGSHSANQGAGGLFDPIGLPPVLGGPGPAAAAGQNQHPPLSLH
AAKELWIFWYGEEPDLSGLVSPELIAADGEQGSWESGLSYECRSLLFKALHNLIERCLLS
RDFVRIGKWFVQPYDGTEKLIGKSTHFSFSFAFFVHGESTVCASMDVRMHPLVRNLTHQH
LLQAQASSSGIPVILAPFGLAGTLTGQAYKTMDVQTKRQLDEWRQFYPIDTKFSSCDVGG
EEVQLPPAVEVVVGGVKMRYPTCYVLVTDMDDPASTVRQGAVSPTGTAAAVMKSVGLPSS
SAAVVTPPCSPCPQPISGGNRPPCSPPPYPSATSGHNPASMQHSPPPATRLPEHVWQDST
LNPTQHEVTAEQSEAASSQQPQAGQWEFADPTRKSMCSCSKCKKGAKHMAQNKGGVNSIG
GVKTLKGEKSEKGSRGSGRGGVMPFHRRSPVADEGAWAVEVAGPLSRLMGGSRTPPGGPP
SYPRGQSMTPNPLPNLHGGGGLGDSVPVPSVGSPASAAPSPLPNPHSQPASVPPADPTMP
TLSPHPPTSNSGAGQPQPATPLESQDKVTPAATPSDLNGPKSVSSVSNQVFSPYPATSSV
EPVTKPVDSVGGGSQGPASAHSVVAPAPPPTATPPDYITLKRPVLSSKEYESILMEEEQP
SELLYDYSTLDAWLNHPVKRFKPSETRPSDSMRPPPYNRRASPNDLYSNHIQHQNVASPP
NSLNQPFIKQEIKQEAGCNVPMEVDNVHPSKRSDPYEFEDDISAPAVSMEGFKRTNSVKE
EERKGGPGNAMGSFDPVTPNGPTNKPISLFTNEGLQASYKDLDQIFDNSDDTSSDETLQV
PTPPGSNKPAGLPEDSASSNVVVKPPRGSGGNTSLNSCGGTGILRPEELSKMFPTPPSLE
HNPIASPCGHLSDGTLGELSDGPVGICIARCKQEIYPNMGSPQEENIEDWSFVFRPPAMC
KFVGSSKYAPLTNLPSQSQPPVTLPSHCVYKPSWQTQYQQQQQQQQQQQQQQQQSGEKSA
PQQSIPNGSLVPSGPGTNSRPNSVASNHHSGAVIPSHPHHQHPTIHHPPIPPHPHRAGLS
PISPAGHFPPSPMTLAAMGGGGLPLHLQQQFRTGGPGSVGGVRTPCPAPPPYELPSPATS
TASSYLNKNLNSVEPVPTPIMARAPEANSLVVNILLGDTALNIFRDHNFDSCTLCVCNAE
PKVVGNIRGADAGIYLPAPPPQPQPSLPFPPTSPYPGMGMNGPPPPYMMGSSPGHHGVAP
NVMGMVSEEDSIRCSCGFSAVVNRRLSHRSGLFYEDELEITGIAEDPGDRRKGSLLAYLV
PNAGKGGQENGSTGDIVDLVPQNVMELVKEQCVIIQSSSNSLYRASRQFRGNLGPDVPYG
TTVNVLEFMDGNDVTYMALEQGRQALLESTTVAMCKVEEMQQRQQQILQHGGKNSSTPCV
HRWPYLRAMGPQCNQDIVWVMKSLRPLLQDVIHKKCTTRLWDAPYTVKGPLTWRQFHRLA
GRGTDDRCEPQPIPSLMVGYEKDWLSLSPYAIQYWEKLLLEPYSYARDVAYIVVAPDNDY
ILQRVRTFFKELSATYEVCRLGRHCPITKVLRDGILRVGKTAAVKLAKEPVDEWFTMLGD
NPTTNMLKLYAQVCRHHLAPHLSQVPLDKTLLEPPEGSQTPRLAIDRPLPSPMPPPSTPE
SNQGQIPDKAPSTPKSDHDGDGSSSGRDPLLSGGQLSSGSGDSNHDDDDQEPPAVVVYLV
DPFTIGSDSTDLQRLACLGLLRCFTTVLSAVPESIRNNISVQLISLESIVELGKSRDRIR
QNDHMRAQAFSVFSQCRRMLTHTSNIKALTGFGTAAMADLFLKSKDEKNRAPYRLYTPPY
VLAPVKEKAESGESFGQCSGEQCSVLYVSYCLSEDQRWLLAVATDERGEIFETATINIDI
PNRSRRKKASARRIGLQKLMDFILGVMSQSVRPWRLVVGRIGRIGHGELKGWSWLLSRKS
LLKASKHLKEICEQCSLMYPNDVPCVLSACLVSLEPDSALRLMPDQFTPDERFSQTSVNC
QLSTPHDVSCTHILVFPTSATSQSSQTAFQEQHINGPDLGDDELFTVLNDDMPEGIEGMQ
DFSDIFSWPETGPGGAQSPTGSPRRGDSPSQPGSPSCGVGGASDQHSPFPCNGSSRGGGS
LGVDTQEEVGTLHQQPLALGYFVSTAPTGRMPKWFWASCPHLENVCPAFLKNALHLHSPA
IQQNSDDLLQQQSAVTVHPLDSQYTTDVLRYVLEGYNALSWLALDSNTRDRLSCLPVHVQ
ALMQLYHMTSALV
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatccaaaccatcaaacaaacggagcgagtttggaggactgccatacaaatttc
ttcgctctgaccgatctgtgcggcatcaaatggcgtaagctggtgtgtggggattacaat
ttctcatcggagcccctggatgaccccgtgttggcgagtttctcgcgctgcctcgccgga
gacatcctgtgcgtgtggcggcgcgtggcgacccagcagccggcgtccgcgactggctcg
cactccgcgaatcagggtgccggcggcctcttcgaccccatcgggctgccacccgtgctg
ggcggccccggccccgccgccgccgcgggtcagaaccagcaccctcctctctcgctccac
gccgccaaggaactctggatcttctggtacggggaggagcccgacctctctggcctcgtg
tcgcctgaactcatcgctgccgatggcgagcaaggatcgtgggagagtggcttatcttac
gagtgcaggtctcttctcttcaaagctctgcataatctcatcgaaaggtgtctgctgtct
cgtgattttgttcgaattggcaagtggtttgtccagccgtatgatgggacagaaaagctc
atcggaaagagcacgcatttctcattctctttcgcattcttcgtgcatggggagagtacc
gtgtgtgcgagcatggatgtgcggatgcatcctctggttcggaacctgacacaccaacac
ctgctgcaggcccaggcttcctcctctggcataccagttattttggcaccttttggattg
gcggggacactaactgggcaggcctataagaccatggatgtccaaacgaaacgccagctg
gatgagtggcgccagttctatcccattgacaccaaattctcgagctgtgatgttggaggc
gaagaagtacaattgcccccagctgttgaggttgtggtaggaggtgttaaaatgcggtat
cctacatgttatgtgttggttacggacatggatgatcctgcatcaacagttcggcaagga
gccgtgtctccgacagggacagctgcagcagtaatgaaatctgttggacttccatcatcg
tcggccgctgttgttactcccccatgttcaccctgtccgcagcctataagtgggggtaat
aggccaccttgctcacctccaccctacccgtcggcaaccagcggccacaacccggcttca
atgcagcacagccctcccccagccaccaggcttccagaacacgtctggcaggacagcact
ctgaaccccacgcagcacgaggtcacggcggagcagagcgaagctgcttccagccagcag
ccacaggcggggcagtgggagttcgcagaccccacacggaaatccatgtgcagttgctca
aagtgtaagaaaggtgcaaaacatatggctcagaacaagggaggagtaaatagtatcggg
ggtgtgaaaacactgaagggtgagaaaagcgagaagggtagccgtgggtccgggcgaggg
ggtgtgatgccattccaccggcgatcacctgtagctgatgaaggggcttgggctgttgag
gtggcagggccgctctcgaggttgatgggaggttcacgtactccgcctggcggtccccca
tcatatccccgtggtcaatccatgactcccaatccactgccaaatctgcacggtggaggt
ggtcttggggattctgtgccagttccatctgtgggctcacctgcttctgctgctccgtct
ccactgccgaatcctcattctcagcctgcatctgtgccccccgcagaccccaccatgccc
acactcagcccacacccacccacctcgaacagcggtgctggccagccccaacccgccacc
cctctggaatctcaggacaaggtcacgccggctgccactccttctgatctcaacggccct
aagtcagtttcatcagtatccaatcaggtgttctcaccgtatcctgccacttcaagtgta
gagccagttacaaaaccagtggacagtgttggtggtggttcacaaggtcctgccagtgct
cactctgtagtggccccagctcctccccccactgccacaccccccgactacatcactctc
aagcgacctgtcctgtcctccaaggagtatgagagtattttaatggaggaggaacaaccc
tcagaattattgtatgattattccactcttgatgcatggttgaaccatccagtgaagagg
tttaagccgtctgagacaagaccttcagactcgatgaggccacctccttacaaccgacgt
gcaagtccaaatgatctgtattcaaaccatatacagcaccagaacgtggcgtctcctcca
aacagtctcaatcaaccgttcatcaagcaggagatcaagcaggaagcaggctgcaatgtg
ccaatggaagtagacaatgttcatccaagcaaaaggtctgatccatatgaatttgaagat
gacatttctgcacctgctgttagtatggagggtttcaaacgaacgaattctgttaaggaa
gaagaaaggaaaggaggcccaggcaatgcaatgggttctttcgatcctgttacccctaat
ggacctacaaataaacctatatctctcttcactaacgaaggtcttcaagcatcatataaa
gacctcgatcagatcttcgataactcagacgatacatctagtgatgaaacgttacaggtg
cccactcctccaggctcgaacaagcccgctgggctgccagaagactctgcatcaagtaat
gtggtggtgaagcctcctcgtggaagtggtggcaatacatctctcaatagttgtggtgga
acaggtatcctcaggcctgaggaattgtcaaaaatgttccctacacctccgtccttggaa
cataatcccatcgcttcaccatgcggacatttgtctgatggaacgcttggggaactctca
gatggacctgtgggaatttgtattgcccgatgcaaacaggaaatatatccaaatatgggt
agccctcaggaggagaatatagaggactggtcgtttgtgttccggccaccggcaatgtgt
aagtttgttggttcgtctaagtatgcaccactgacaaatctccccagccagagtcagcca
ccagtgacgttgccctctcactgtgtgtacaaaccgtcttggcagacacagtatcagcag
caacaacagcaacagcagcaacaacaacaacagcagcaacagtcaggtgaaaagtccgca
ccccagcaaagtattccaaatgggagcttggtaccatccggccctggtactaattcgaga
cctaattctgtagccagtaaccatcactcaggtgccgtgattccatctcatccacatcac
caacatcctaccattcaccatccccctatacctccgcatcctcatagagcaggcctatcg
ccaatatcacctgcgggacatttcccacctagccccatgaccctggctgcaatgggcggt
ggtggtttaccattacatttacaacagcagttccgaacaggaggccccggttcagtggga
ggtgttcgaacaccgtgtcctgccccaccgccatacgaacttcccagcccagcaacgtct
actgcatcgtcctacctcaacaagaatttaaattcagtggaaccggtgccaacaccaata
atggctcgtgctccagaagctaattcgctggtcgttaacattcttttaggtgatacagcc
cttaatatctttcgagatcacaattttgatagttgtaccttatgtgtgtgtaatgcagaa
ccaaaagttgtaggcaatattcgaggtgctgatgctggaatttacctaccggcaccacct
ccgcaaccacagccttccttaccgtttcctccaacctcaccatatcctggcatgggaatg
aatggtccacctccaccgtacatgatgggatcctcccccggccatcacggagttgcaccc
aacgtgatgggaatggtctccgaagaagactcgatccggtgtagctgtggcttcagtgcc
gttgtgaacagaagactttctcatcgttcaggcctcttctacgaggacgaactcgaaatt
acaggcattgcagaggatccgggtgaccgcagaaagggttcgcttttggcttaccttgtt
ccgaatgccggtaagggtgggcaagaaaatggaagtactggtgatatagtggatctggtg
ccgcaaaatgtgatggagttagtgaaagaacagtgtgttattattcaaagttcaagcaat
tctttgtaccgtgcttcaagacagttccgtggaaatttgggacctgacgtgccatacggc
acaacagtgaacgtgttagaatttatggatggtaatgatgtgacatatatggcattggaa
cagggacgccaggcattactggaaagtacaacagtagcaatgtgcaaagtagaagaaatg
caacagagacaacagcaaatcttgcagcatggtggcaagaattcaagtacaccgtgtgtc
cacaggtggccctacttgagggcgatgggacctcagtgtaaccaggacatcgtctgggtt
atgaagagtctcaggcctctcttacaggatgtaatacataagaagtgtactacgagactg
tgggatgccccatacacagtgaagggaccactgacatggagacagttccacaggcttgca
ggcagagggactgatgatcggtgtgaaccacaacctatcccttcactcatggttggctat
gagaaagactggctttccctgtcaccatatgcaatacagtactgggaaaagttgctgctg
gaaccatattcctatgccagagatgtggcctatattgtggttgctcctgacaacgattac
atccttcaaagggtgcgcacctttttcaaagagctgagtgcaacctatgaggtctgccgc
ctaggtcgtcactgccctatcaccaaagttttgcgagatggtattctcagagttggtaaa
acagctgctgtcaaattagcaaaggagcctgttgatgaatggttcacaatgcttggagat
aatccaaccacaaatatgctcaaattgtatgctcaagtgtgccggcaccatttagctcca
catttgtcacaggtaccgttggacaagacattattggagcctcctgaaggatcacaaact
ccacgtctggcaatcgatagacctttaccttcaccaatgcctccgccctccactcctgag
agtaaccaaggacaaataccagataaagccccctcaacacctaagtcagatcatgatggc
gacggaagctcgagtgggcgtgacccattgctgtcaggaggtcagctcagtagtggtagt
ggtgacagcaaccacgatgacgacgaccaggaacctccagctgttgtcgtctatcttgtg
gatcccttcacaataggtagtgacagcacagatctgcaacggttggcttgcctcggcctt
cttcgctgcttcaccacagttctgtctgctgttccggagagtatacgcaacaacattagt
gttcaattaatttctctggaaagcattgtggaattggggaagtctcgtgatcgaattagg
cagaatgatcacatgcgagcacaagcattctcagtgttctctcagtgcaggcggatgctc
acgcacacgtccaacataaaggcactcactggctttggcactgctgccatggcagatctc
ttccttaaaagtaaagatgagaagaatcgagctccatatcgtctgtacacaccgccctat
gtgttggctcctgtaaaagaaaaggcagagtctggagagtcatttggccaatgcagtggg
gagcaatgctctgtgttatacgtaagctactgtctgtcagaagaccagcgatggctgctg
gctgttgcaactgacgagcgtggcgaaatatttgagactgctactattaacattgacatc
cctaatcgcagccggagaaagaaagcatctgcaagacgcattggactgcaaaaattgatg
gactttattttaggtgtgatgtcacagagtgttcgaccttggaggcttgttgtgggccgc
atcggcaggatagggcatggagaactaaaaggctggagttggctgctcagtcgtaagtcc
ctgctgaaggcttcaaagcacctgaaagagatctgtgagcagtgcagccttatgtacccc
aacgatgttccgtgtgtgctgagtgcgtgtctggtatccttggaacctgattctgcactt
cggttgatgcctgatcagttcactccggatgagaggttcagtcaaacatctgtaaactgc
caactgtcaaccccgcacgatgtgtcttgcacacacatcctggtgtttcctacatctgcc
acaagtcagtcttctcagacagctttccaggaacagcacatcaatggaccagatctgggg
gatgatgaattattcacagttctgaatgatgatatgcctgaaggtatagaaggcatgcag
gacttcagtgacatattctcatggccggaaacaggacctggaggtgcacaaagcccaaca
ggcagcccacgaagaggagactcaccttcacagccaggaagtccgtcttgtggtgttggc
ggtgcttcagaccagcatagcccttttccttgcaacggctcatcaagaggtggaggaagc
ctaggtgtagatacgcaagaagaagtcggaacattacaccaacaaccgttagctttggga
tactttgtatccactgcccctactggccgaatgcccaagtggttctgggcttcttgtccg
catctggagaatgtttgcccagcatttctgaaaaatgctctccatcttcacagtccagct
atccagcagaactccgatgatctcttgcagcagcagtcggcagtcactgtgcatcccttg
gattctcagtacaccacagatgtactaagatatgtgcttgaaggttacaatgctttatct
tggttggcattggattccaatacaagagatcgtctatcctgcctgccagttcacgtccag
gctttaatgcaactctaccacatgacgtctgcactagtctga
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integrated database retrieval system
