Periplaneta americana (American cockroach): 138698124
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Entry
138698124 CDS
T10946
Symbol
Smg5
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5 isoform X1
KO
K11125
protein SMG5
Organism
pame Periplaneta americana (American cockroach)
Pathway
pame03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pame00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138698124 (Smg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pame03019
]
138698124 (Smg5)
03032 DNA replication proteins [BR:
pame03032
]
138698124 (Smg5)
Messenger RNA biogenesis [BR:
pame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
138698124 (Smg5)
mRNA cycle factors
Common to processing body (P body) and stress granule
138698124 (Smg5)
DNA replication proteins [BR:
pame03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
138698124 (Smg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Nucleo_P87
DUF3719
TFIIA
Motif
Other DBs
NCBI-GeneID:
138698124
NCBI-ProteinID:
XP_069679960
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All DBs
Position
4:complement(117092739..117627777)
Genome browser
AA seq
1094 aa
AA seq
DB search
MKKSYNPISDVRNESVELTRRLYRAISDVSRHLDDRRGRAQTCNDLFSPTVETQRVRLRE
YCERLIFSDPIGYGRKGEELLWRKGYYDVVTTAKRLRKNNTWSPLEIAYMQSHLAAGVGH
YHHLLFRLQIEFKLDLRGIVDFPFLVNDQGLIKDKVSSSTKVLDNNCVEWAKQAVHRCLV
YLGDLSRYFLDLHPHWDTGLAVRYYLQASNLNVDIGMPHNQLGTLSGTRNYGLDAAYHYM
RCLMCKQPFDGAEGNLQRLLEKNSQWFEVHCNNQNRVEDSLSLHPAEHIHQLISRFLFLA
DIWFFNKRSLVETHKVCHQLLISLQQCLAYNKPFPGDGCEMKGEQIDLEQLSLFQTSEED
QENPEYLKDDLIFKMVVMSLLCVTKLQTSGSSQLTAVVAFTLAMFSQLVQQVIHHVQDSV
FNMSFTSFASPPTTTYSLELNSTQSAGESNSNVPLPTHTLNNGEPSGQSCATQDTVAIVN
GCSSAGKNNSQEAKAVTKKKKSKHLQRLRGRRRRRRRRQNSSEDSDLSDGDFSYGGGSSS
SEDGNSDISESAEPDLDLSSDEEDEDDDDDEDEDEDEDDEDEEEEAKTSHTNSDGSKIDN
LPLTNGKICNHIEVKEQKECSDLKFGKKDNLPESILANPSINLNGLGEEESSCNDSLVVS
SNSSNNLKALTNKGIYNESKDVDKSSVKNSQVLDPADILELVAEEGLLDAVKVCADWLHG
DSDIIKACGRSSRTLLTRFITLLNLVIMEADAFEKGSDVGQYIKLKNIQEMFSKIPLPED
VMLKGLPVLKCIHDKMDWDYLRHHCLNAKEEALLRVYKLVDFGHFLTTIPDTGVCYDTQQ
RLFSIISDEGIASEMSDEKTEENSVTNQVPDDNDAGINHHSASASNPSSTSRRGQLMHHM
GQLWLRAEVRDLESRVRRRGASFSPYLAVDSDALIHYIHLVKQLVGARKFIILIPSVVVS
ALDELKREIGRARETIRWLESQFQRGNRFLRAQRSHERLPLPLIKYPKKKDKEAWLYFQV
VECCHYFSQQTGVHETLPETPLVTLLTGQKSCASSKDEGNKGFSPLGVAKSAGINLEHIE
LFHAKWKTSSKSHG
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcctacaatccgatttcggacgtaagaaacgaaagcgtcgagttaacaaga
cgcctttatagagcaatatccgatgtatccagacatctggatgatcgtcgtggaagggcg
caaacatgcaatgacttgttctcacctactgttgaaacccaacgggtgaggctgagagaa
tattgtgagcgtttgatattctcggaccctatagggtatgggcgtaagggtgaagaactc
ctatggaggaaaggatactatgatgttgttacaactgctaagaggcttagaaagaacaat
acttggagccccttagaaattgcttatatgcaaagtcatctggcagctggagtgggccat
tatcatcatctgttgtttcgtctccagattgaattcaagcttgatttacgtggaattgta
gattttccattccttgtgaatgatcaagggttaataaaagacaaggtgtcatcttcaacc
aaagtattagataacaactgtgtggaatgggcaaaacaagctgttcatcgatgtttggtt
tatttaggagacctaagtcgttactttttggatttacatcctcactgggatacaggtctt
gctgtccgctactacctacaagcttcgaatttgaatgtggatattggtatgcctcataat
caacttgggacattgtcaggaactcgcaattatggattggatgcagcataccactatatg
cgctgcttgatgtgtaagcaaccttttgatggtgcagaaggtaacttacaaagattgtta
gaaaaaaattcacagtggtttgaagtgcactgtaacaatcaaaatcgagttgaagatagc
ttatctctccaccctgccgagcatatccatcagctgatctcaagatttcttttcctagca
gatatatggttcttcaacaagaggtcattagttgaaactcataaggtgtgccatcaactg
ttaataagtctgcagcagtgcttggcatataataaaccattcccgggtgatggctgtgaa
atgaaaggagaacagatagatctggagcaattgtcactttttcagacaagtgaagaggat
caagaaaatccagaatacctaaaagatgatctcatcttcaaaatggttgttatgtcacta
ttatgtgttaccaaattgcaaactagcggttcttcacaactaacagctgtagttgccttc
acattagctatgttttcacaactagtccagcaagtaatccatcatgtacaagattcagtt
tttaacatgtcctttacatcttttgcttcacctccaaccacaacttattcactggaactt
aactctactcagtcagcaggagaaagcaatagtaatgttcctttacccactcatactctg
aacaacggtgaaccctcaggtcaatcctgtgctactcaggatactgtggctattgtaaat
ggatgtagttcagcaggaaaaaataatagtcaagaagcaaaagctgttaccaagaaaaag
aagtctaaacatttacagagacttagaggacgaagacgtagaagaagaagacgacaaaac
agttctgaagattctgatttgagtgatggagatttctcatatggtggtggcagttcaagc
tcagaggatggaaattcagatataagtgagagtgctgaaccagatttggatttgagctct
gacgaggaagatgaggatgatgatgatgacgaagatgaagatgaggatgaggatgatgaa
gatgaagaagaagaggcgaaaacatctcatacaaattctgatggttcaaaaatcgataat
ttgccattaaccaatgggaaaatttgtaatcatattgaagtgaaagaacagaaagaatgt
agtgatctgaaatttgggaaaaaagataatttacctgaaagcattcttgccaacccatca
ataaatctgaatggtttgggtgaagaagaaagcagttgtaatgatagtttagtggtcagt
agtaacagttcaaataatttgaaagcactaacaaataaaggaatttataatgaaagcaaa
gatgttgataaaagcagtgttaaaaacagtcaagtgctcgatccagcagacatacttgag
ttggttgctgaagaagggctgctagatgcagttaaagtgtgtgcagactggcttcatggg
gatagtgacatcataaaggcatgtggtcgcagctcacgtacactgttgaccagattcatc
accttgttgaaccttgtcattatggaagcagacgcatttgagaaaggttcagatgttggt
cagtatatcaaactaaaaaatattcaagaaatgttcagcaagatccctttgcctgaggac
gtgatgctgaaaggcctccctgtgctgaagtgtattcatgataaaatggactgggattat
cttcgacatcactgtcttaatgctaaagaagaggctttattgcgtgtgtataaactggta
gactttggtcacttcctgacgaccatcccagatacaggggtgtgttatgacacacagcaa
aggctcttcagtatcatcagtgacgaaggaattgcgagtgaaatgtcagacgaaaagacg
gaagaaaattctgtaaccaatcaggtgccagatgacaatgatgccggaataaaccatcat
tctgcctccgcttcaaacccaagctcaacctctcgtcgaggtcagttgatgcatcatatg
ggtcaactatggctgcgtgctgaagtgcgtgacttggagtccagggttcgacgtcgaggt
gcctccttctccccttaccttgcagtagacagtgatgccctaattcattatatacattta
gtgaaacagctggtaggagcccgaaaattcatcatccttattccttctgttgttgtgtca
gcactagatgaactgaaaagagaaattggaagagcacgagaaactatccgctggctggag
tcacagttccaaagaggaaatcgtttcttacgagcccaacgctcacatgaacgcctgcca
ttgccgctgatcaagtatcccaagaaaaaggacaaagaggcatggctctatttccaagtg
gtggagtgctgccattatttcagccagcagacaggagtacatgaaacgcttcctgagaca
ccactggtgacactattgactgggcaaaagagttgtgcatctagcaaagatgaaggcaac
aaagggttcagtcctctcggtgttgctaaatctgcaggaatcaacttggagcatatagag
ctatttcatgccaagtggaaaacatctagtaaaagtcatggctga
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