Periplaneta americana (American cockroach): 138700856
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Entry
138700856 CDS
T10946
Symbol
Sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
pame Periplaneta americana (American cockroach)
Pathway
pame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138700856 (Sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pame03041
]
138700856 (Sf3b1)
03036 Chromosome and associated proteins [BR:
pame03036
]
138700856 (Sf3b1)
Spliceosome [BR:
pame03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
138700856 (Sf3b1)
Complex B
138700856 (Sf3b1)
Complex C
U2 SnRNP specific factors
138700856 (Sf3b1)
Chromosome and associated proteins [BR:
pame03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
138700856 (Sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
HEAT_2
Htt_N-HEAT_1
XMAP215_CLASP_TOG
UME
DUF2298
Motif
Other DBs
NCBI-GeneID:
138700856
NCBI-ProteinID:
XP_069683329
LinkDB
All DBs
Position
6:866714..892648
Genome browser
AA seq
1344 aa
AA seq
DB search
MFYALHLWNNLYKMEAIPRTHEDIEAQIRDIQSRKKDLIDEMKEKERVGLGESGFYDRDI
YDGGGNKYDGYVTSIAANDEVDDEDDIVSLSHTKRPGYTAPAALLNDVAQSEKDYDPFEQ
RRRPTVAEKEDEYRQKRRQMIISPPRIDPFEEGGKTPDLGSRTFTVIMQEQMLRGEETEL
RKQIVEKSKDGTLKVVSNGDIPKSAPKKRGRWDQTGGDEGVTPVKKKATSNSVSSSWDKE
DATPASTRWDETPGHGKGGETPGATPGQSTRMWDATPGHATPGHATPGRETPSHDKGASS
RRNRWDETPKTERETPGHNSGWAETPRTDRTGAGDLIQETPTPSASKRRSRWDETPSSQM
TPGAMTPQTPGTPHTPHGTPHGTPHATPSLMTPSGVTPTGTKAMAMATPTPGHLATMTPE
QLQAYRWEREIDERNRPLSDDELDAMFPPGYKVLTPPAGYIPIRTPARKLTATPTPIAGT
PAGFFIQQEDKSAKYMDNQPKGNLPFMKPEDAQYFDKLLVEVDEESLSPEEQKERKIMKL
LLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRIL
YKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNI
DEYVRNTTARAFAVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAIL
PHLKSLVEIIEHGLVDEQQKVRTITALAIAALAEAATPYGIESFDSVLKPLWKGIRTHRG
KGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDG
VESQYIKDEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIANKVGASEIINRVVDDLKDE
NEQYRKMVMETIEKIMGNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQ
LGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYE
YLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVG
RIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNN
LKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGE
MGKDYIYAVTPLLEDALMDRDLVHRQTACAAIKHMALGVYGFGCEDALIHLLNHVWPNIF
ETSPHLVQAFMDSIEGLRVALGPNKILQYVLQGLFHPARKVRDVYWKIYNSLYIGGQDAL
VAGYPRIVNDPKNQYIRYELDYIL
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgttctatgcacttcatctatggaataacttgtacaagatggaggctataccgagaacc
catgaagatattgaagcacagattcgggacattcagtcccggaagaaagaccttattgat
gagatgaaagaaaaagagcgagttgggctgggtgaaagtggattttatgacagggatatt
tatgacggtggcggcaataaatacgacggctacgtaacgtcaattgcagctaacgatgaa
gtggacgatgaagatgacattgtgtccctcagccacaccaagcgtcccggctacacggct
ccagctgcattactcaacgatgtggctcagagtgagaaggattacgacccgtttgagcag
cggcgacgtccaacagtggcggagaaggaggacgagtacaggcagaagagaaggcagatg
atcatatcaccaccacgaattgacccgtttgaggaaggtggcaagactccagacctcggc
tctcgaacgttcaccgtgattatgcaggaacagatgctccgtggagaagagacagagcta
agaaagcagattgttgagaagtccaaagacggaacgctgaaggttgtaagtaacggtgat
attcctaaatctgcacccaagaagcgcgggcgatgggaccagactggaggcgatgaagga
gtgactccagtgaagaagaaagccaccagcaacagcgtgtcttcctcgtgggacaaggaa
gatgccactcctgcatcaactcgctgggacgagacacctggtcatggcaaagggggagag
actccaggagccaccccaggacagagcactcgcatgtgggatgccacccctggtcacgcc
acaccaggccacgccacaccagggagggagaccccaagtcatgacaagggggcgtcaagt
aggaggaaccggtgggatgagacccccaaaactgagagagaaacgcctggacacaacagt
gggtgggcagagacacccagaacagatcgcactggagctggagacctgatccaggagaca
ccaacaccatctgccagcaaacggcgcagtcgatgggatgagacgccatcaagccagatg
actccaggggctatgaccccccagacaccagggactccacacacgccccacggcactccg
catggaaccccccatgccactccttcactcatgacgcctagcggtgtcactcccacaggg
acaaaggcgatggcaatggccacacccacccctggacatttggccaccatgacgccggag
caactgcaggcttatcgctgggagcgagagatagacgagaggaaccgccctctgtctgat
gacgaactggacgccatgtttccccctggctacaaagtgctgactccacctgcaggttac
atacccatccgcacaccagcacgcaaactgactgccacgccaacaccaatagctgggaca
cctgcaggattcttcatccagcaggaggacaaatctgccaagtacatggacaaccaacca
aaggggaacctgcccttcatgaagccggaagacgcgcagtacttcgacaagttgctggtg
gaggtggacgaggagagcctgagcccggaggagcagaaggagcgcaagatcatgaagctg
ctgctcaagataaagaacggcacacctcccatgcgcaaggctgctctccgtcaaatcaca
gacaaagcgcgtgagttcggagcaggccccctcttcaaccagatcttgcccctgctcatg
tcgccgactttggaggaccaggagaggcatctactggttaaagtcattgaccgcatcctg
tacaagttggacgacttagtgaggccctatgtccacaagattctagtggtgatcgagccc
ctgctcattgatgaagactactatgcacgtgtggaaggtcgtgagatcatctctaacttg
gcgaaagctgctgggttggcaaccatgatctccacaatgcggcctgacattgacaacatc
gatgagtacgtgcgtaacaccacagcaagagcctttgcagtggtggcatcagctctggga
atcccctctctgctgcccttcttgaaagcagtgtgtcgcagcaagaagtcgtggcaagca
cggcacaccggcatcaaaatagtgcagcagatcgccatcttgatgggctgtgcaattctg
ccccatcttaagagtctggtggagatcatagaacacggtcttgtcgacgagcagcagaag
gttcggactatcactgccttggccattgctgcgcttgcagaagctgctactccgtacggc
atcgaaagctttgactctgtcctgaagcctttgtggaagggtatccgaacacacagagga
aagggtctggctgccttcctgaaggccatcggctacttgatcccattgatggacgccgag
tatgccaactactacactcgggaagtgatgctgatcctgattcgagagttccagtcgccc
gacgaggagatgaagaagatcgtgctgaaggtggtgaagcagtgctgtggcactgacggc
gtggagtcccagtacatcaaggacgagatcctgccccacttcttcaaacacttctggaac
caccgcatggctctcgaccgtaggaactacagacagcttgtggacacgactgtggagata
gccaacaaggtcggggcctctgaaatcataaatcgtgtggtggacgacttgaaggatgaa
aatgagcagtaccgcaaaatggtgatggagactatagagaagatcatggggaatcttgga
gctgcagacatcgactcccgcctggaggagcagctgatagatggaatcctgtatgcattc
caggaacagacaaccgaggacgttgtgatgctcaatggctttggcaccattgtcaaccag
ctgggcaagcgggtgaagccgtacctgccccagatctgcggcaccatcctgtggcgactc
aataacaagtctgccaaagtgcgacagcaggctgcggatctcatttcgagaatagccgtt
gtgatgaagacgtgtcaggaggaaaaactgatgggccacttgggcgttgtgctgtacgag
tatttgggagaggaatacccagaggtgctgggcagcattctcggggctctgaaggcaatt
gtcaacgttattggcatgacaaaaatgacgccacccatcaaagacctgcttccaaggctt
acacctatcctgaagaatcgacatgaaaaggtacaagagaactgtatcgatctggtgggt
cgtattgctgacagaggtcctgagtacgtgtccgctcgggagtggatgcgaatttgtttc
gaactgctggagttgctcaaggcccacaagaaggccatcagaagagccactgtcaatacg
tttgggtatattgcaaaggctatcggtccacacgatgtattggcaaccctgttaaacaac
ttgaaggtgcaggagcgtcagaacagagtttgtacaacagtggcgattgctattgtggca
gaaacctgctctccgttcacagtgttgccagctcttatgaatgaatacagggttccagaa
ttgaatgtacaaaatggcgttttgaagtcattatcctttctcttcgaatacattggggaa
atgggcaaggactacatttatgccgtgacaccgctactggaggacgccttgatggacagg
gatctggtgcacagacagacggcctgcgcggccatcaagcacatggctctgggggtgtac
ggctttggctgcgaggacgcactcatacacttgctgaaccacgtgtggcccaatatattc
gaaacttctccacatctcgttcaagccttcatggactccatagaaggccttcgagttgcc
ctgggaccaaacaagatacttcaatatgtgttgcagggtctcttccatccagcaaggaaa
gtgcgggacgtgtactggaagatctacaattcgctctatatcggtggacaggatgctttg
gtggctggttaccccaggatagtcaatgaccctaagaaccaatacattcgatatgaactg
gattacattctctga
DBGET
integrated database retrieval system
