Periplaneta americana (American cockroach): 138701220
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Entry
138701220 CDS
T10946
Symbol
Rnp4F
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
pame Periplaneta americana (American cockroach)
Brite
KEGG Orthology (KO) [BR:
pame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pame03041
]
138701220 (Rnp4F)
03036 Chromosome and associated proteins [BR:
pame03036
]
138701220 (Rnp4F)
Spliceosome [BR:
pame03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
138701220 (Rnp4F)
Chromosome and associated proteins [BR:
pame03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
138701220 (Rnp4F)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
RRM_occluded
RRM_11
LSM_int_assoc
Lsm_interact
RRM_7
RRM_10
HAT_Syf1_M
RRM_ACIN1
AF_0136_N
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
138701220
NCBI-ProteinID:
XP_069683993
LinkDB
All DBs
Position
6:complement(37382769..37422948)
Genome browser
AA seq
950 aa
AA seq
DB search
MSAEDVYESEKMETDKMSDKDKISDKSSDSEDESSDETSDNEEEQDKQATQLEKKIKRNP
YEYNTYIELIKLLQKMAEIDRLRKARESMSKHFPLTPELWLSWLKDEMGLATSDIERTAV
AELFERAVQDYLSVDLWLEYAQFSIGNMGLQYGVKIVRDTFERALTSVGLHVAKGAILWE
AYREFENVMLGMLQAKVNADSNDAQKQELDAQKKRMVAIFRRQLACPLLDMEKTYQEFTE
WLNEEPDRRDDVDMKNIENGFKKALLKLSKILPFEEQLLSSDDASRAEHYRAYVQHEISE
GDPARVQCLYERAVAELCLDASIWLEYVEYLYSTLKIDTVVLPVCKRAVRNCPWSSPLWQ
HYMKALERYEKSFDEIKEVMEQALSVGFSNAEDYRNLWLCYIDYMRRRVDWSKGYQPIEV
AELRGTFNRACEHLAQYFGLQGDPNCDILQYWARIEAAHCGNMEKFRLLWSDILGQGHEK
TAAMWLEYIQWERAFGDNKHLRRLFPRALMCTEDWPESIGNAWLNYERDEGTLDSFEFCM
SKYKSRLKQINDLRKRIAEKQAEMIEQDKWRQERRQEKGKKQNPKDTWKKKHETEGKWAA
VAPKSTLTKPGSKNIAEVASTPSKQSSVAEPPPGYEKRERTVDTSEEPSAKKSKGEKMET
EHGVTVVHDSSKDNRTVFVSNLDYSVTEDRLKEVFSSIGTLTDLRLVKDYKGRSKGFCYV
EFSSVAEAETALKRDREPMDGRPMFISKCDSDKHTRQSGFKYSSTLEKNKLFVKGLPLSM
TKEELEEIFKPYGSLKDVRIVTYRNGHSKGLAYVEFDDEAAAAHALIKTDGMTFGERTIS
VAISKPPERKNTPAAVSSSSSSSVSVTSLGGGVKDLGPRGRGRTQVSLLPRALQVSRNTS
ATNVPAPSSVTSNGSNSSSTTNGDDGGGSGDARKPMSNSDFRQLLLGTKK
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggaagatgtgtacgaaagtgagaaaatggaaactgacaaaatgtcagacaaa
gataaaatatctgataaatcaagtgacagtgaagatgaatcttcagatgaaacgtcagat
aatgaagaagagcaagataaacaagccacccaacttgagaaaaagattaaacgaaaccca
tatgagtataatacatacatagaactcataaaactacttcagaagatggctgaaatagac
agacttcgaaaagcaagagagtcaatgagtaaacattttcctttgactccagaactgtgg
ctgtcctggttgaaagatgaaatgggtctggcaacatctgatatagaacgtacagctgta
gcagaattatttgagagagctgttcaagactatctgtctgttgatctgtggctagaatac
gcccagttcagtattggcaacatgggattacagtatggtgttaaaatagtgagagacaca
tttgaacgtgcactcacaagtgttggcctacatgttgccaagggagcaatattatgggag
gcctatcgtgagtttgagaatgtgatgcttggtatgttacaggccaaggtcaatgcagac
tcaaatgatgctcagaaacaggaattagatgctcagaagaagcgaatggttgctatattt
cgtcgtcaattggcttgcccactcctcgatatggagaaaacttaccaagaatttacagag
tggctaaatgaagaaccagacagacgggatgatgtagacatgaagaacattgagaatgga
ttcaagaaagcacttctaaaactgagcaaaatacttccttttgaggaacaattgctgagc
tctgatgatgccagtagagcagagcattatcgagcctacgttcagcatgagatatctgag
ggtgacccagctcgagttcaatgtctctatgaaagagctgttgctgaactctgtcttgat
gcttcaatctggctggaatatgtggaatacttgtactccacactcaaaatagacactgtt
gtgttgcctgtgtgcaaacgagccgtacgaaattgtccctggagttctccattatggcaa
cattacatgaaagctcttgaaagatatgagaaatcgtttgacgaaattaaagaggtcatg
gagcaagcactatcagttggattcagtaatgctgaagattatcgcaatttatggctgtgt
tatattgactacatgagacgcagagtggactggagtaaaggttaccaacctatagaagta
gcagagctgagaggaacatttaacagagcatgtgaacatcttgcacagtattttgggctt
caaggtgatcctaattgtgatattcttcagtactgggctcgaattgaagctgctcattgt
gggaacatggagaagttcagacttttgtggagcgatatccttggccaaggacatgagaaa
acagcagccatgtggcttgaatacattcagtgggaaagagcatttggagacaacaaacat
ttgaggcgtttgtttccacgcgcacttatgtgcactgaagactggccagagagtattggg
aatgcatggctcaactacgaacgagacgaaggcacacttgattcatttgaattttgtatg
tcgaaatataagtcaaggctgaagcagataaatgacctcagaaaaagaatagctgaaaaa
caagcagaaatgatagaacaggataagtggagacaagagcgaagacaggaaaaggggaag
aaacaaaaccctaaggatacatggaaaaagaagcatgaaacagagggtaagtgggcagca
gtagctccgaagtctacgcttacaaaaccaggttcaaagaatattgcagaagtcgcatcc
actccttccaaacaaagttcagtagccgaacctccacctggttatgaaaagagggagaga
acagttgacacatcagaagagccatcagccaaaaaatcgaaaggggagaaaatggaaaca
gaacatggagttacagtagttcatgattcatccaaagacaaccgaacagttttcgttagt
aatcttgattattctgtgactgaagataggttaaaggaagtcttttcctccattggaact
ctcacagatcttcgattggtgaaagattacaagggtcggtccaaaggcttttgctatgtg
gagttcagttcagtcgctgaggcagaaactgctttgaaaagagatcgtgaaccaatggat
ggacgaccaatgttcatatcaaaatgcgattcagataaacatacgaggcagtctggtttt
aaatacagcagtacactggagaagaacaaactattcgtgaaaggtttgccattgtccatg
acaaaggaagagcttgaagaaatattcaaaccatatggttctttgaaagatgtgaggatt
gtgacatacagaaatggacattcaaaaggactggcatatgttgagtttgatgatgaggca
gctgcagcacatgcactcatcaaaactgatggaatgacctttggtgaaagaactatttct
gtagcaatcagtaaaccacctgaaaggaaaaacaccccagcagctgtttcatcttcatct
tcatcttctgtttctgttacgtcgttgggaggaggagttaaagatcttggaccgcgtgga
cgtggtcgaacacaagtgtccctacttcccagagcattacaagtgtcacgcaacacttct
gctaccaatgtacctgcacccagctctgttacaagtaatgggagtaatagcagcagcacc
acaaatggtgacgatggtggaggaagtggagatgcccggaaaccaatgagtaattcagat
tttcgacagctgctgcttggaacaaagaaatga
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