Periplaneta americana (American cockroach): 138703505
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Entry
138703505 CDS
T10946
Symbol
fand
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pame Periplaneta americana (American cockroach)
Pathway
pame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138703505 (fand)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pame03019
]
138703505 (fand)
03041 Spliceosome [BR:
pame03041
]
138703505 (fand)
Messenger RNA biogenesis [BR:
pame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
138703505 (fand)
Spliceosome [BR:
pame03041
]
Complex B
Other components
Prp19-related factors
138703505 (fand)
Complex C
138703505 (fand)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_2
TPR_8
TPR_15
TPR_12
ARM_TT21_C
DHR-2_Lobe_A
NRDE-2
TPR_10
PPR
Motif
Other DBs
NCBI-GeneID:
138703505
NCBI-ProteinID:
XP_069687509
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All DBs
Position
7:complement(143612023..143647587)
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AA seq
871 aa
AA seq
DB search
MSSYEEQGDIELIFNEDDLPYEEEILRNPFSVKHWLRYIEHKKGSPKHTVNIIFERALKE
LPGSYKLWYSYLKLRRRQIKGLCITDPSYEDVNNAYERSLVFMHKMPRIWLDYCQFLMDQ
CRITRTRHVFDRALRALPITQHHRVWPLYLKFVEMHNIPETAVRVFRRYLKLYPEDAEDY
IEYLISIGRLDEAAMKLAYIVNKEDFVSKHGKSNHQLWNELCELISKNPDKVRSLNVDAI
IRGGLRRYTDQLGHLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFE
ELSLSKRMEEAAENLNPTEEDDIDLELRLARFEHLMERRLLLLNSVLLRQNPHNVHEWHK
RVLLYEGKPHEIINTYTEAVQTVDPKLAVGKLHTLWVAFAKFYEENSQIDDARVVFEKAT
HVPYSKVDDLASVWCEWAEMEIRHENYEEAVKLMQKATVMPPRKVAYHDETETVQMRLYK
SLKVWSMYADLEESFGTFKSCKAVYDRIIDLKIATPQIIINYGLFLEEHKYFEEAFRAYE
KGIALFKWPNVYDIWNTYLTKFLNRYGGTKLERARDLFEQCLENCPPKFAKTLYLLYAKL
EEEHGMARHAMAVYERATKAVLPEEMFELFNIYIKKAAEIYGVPKTRQIYEKAIEVLTEE
NAREMCLRFAEMETKLGEIDRARAIYAHCSQMCDPRVTADFWQTWKEFEVRHGNEDTMRE
MLRIKRSVQATYNTQVNMMSAQMLSAASNVSGTVADLAPGAKDGMRMLEAKAAQMAHLER
PAQQQPKGGNILFVRGETQGMDRDGTDTTRVINPDEINIDYDDEDDEEEEGDEAEQEAED
DLPVQKQPIPQEVFGSLKKPDDDDDDDEENE
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatacgaagaacagggtgatatagagcttatctttaatgaagatgatttacca
tatgaagaggaaattcttcgcaatccattttctgttaaacattggctgcgatacattgaa
cacaaaaaaggaagtccaaaacatactgttaatattatatttgaaagagcactgaaggaa
ctaccaggaagctataagttatggtatagttatctcaagcttcggaggagacaaatcaaa
ggattgtgtattacagatccttcatatgaagatgtgaataatgcttatgagagatctttg
gtgttcatgcataagatgccgagaatctggcttgattattgccagtttttgatggaccag
tgtcgcatcactagaacacggcatgttttcgatcgagctcttcgtgctctaccaattaca
cagcaccatcgtgtttggccactctatctgaaatttgtggaaatgcacaacattcctgaa
actgctgttagggtgtttaggaggtatcttaagttatatcctgaagatgctgaagattat
attgaatacttgatatcaataggaagattggacgaagcagctatgaaacttgcatatatt
gtgaataaagaagattttgtgtcaaaacatggcaagtcaaatcatcagctgtggaatgaa
ctctgtgaactaatatctaagaatccggacaaagtaagatctctgaatgtggatgctatt
attcgcggagggcttagaagatacacagaccaattaggtcacctctggaactctttggca
gactactatgtccgtagtggtctctttgagagggccagagatatttatgaagaagctata
cagactgttactactgtgagagatttcactcaggtatttgatgcttatgcacagtttgaa
gaattaagtctcagtaagagaatggaggaggcagcagaaaatttaaatccaacagaagaa
gatgatattgatttagaacttcgattggctcgatttgagcatcttatggaacgaagacta
ctgctgctgaattcagtacttttgcgtcagaatccacacaacgtacacgagtggcataaa
cgagtgttgttgtatgaaggcaaaccgcatgagatcattaatacatacacagaagcagtt
cagaccgtagatcctaaacttgctgttggtaaacttcacactttatgggtcgcatttgcg
aaattttatgaagagaatagccaaattgatgacgctcgtgttgtttttgaaaaagctact
cacgttccgtacagcaaagtggatgatttagcatcagtctggtgtgaatgggcagagatg
gaaatacgccatgagaattacgaagaagcagtgaagttaatgcagaaggcaacagtgatg
cctcctcgcaaagtggcttaccatgatgagacagaaactgtgcagatgaggctgtacaag
tcacttaaagtgtggtctatgtatgcagatttggaggaaagtttcggcacattcaagtcc
tgcaaagcagtatacgaccgtatcatagatttaaaaattgctacacctcagattataatc
aattatgggttgtttctggaagaacacaagtacttcgaagaagcatttagagcctatgaa
aagggcattgcgttgtttaaatggcccaatgtgtatgatatatggaatacatatttgact
aaattccttaatcgttatggaggaacaaaacttgaacgggcaagagatctgtttgaacag
tgcctagagaactgtccaccaaaatttgcaaagaccctttacttactatatgcgaaatta
gaagaggagcatggaatggcaagacatgctatggctgtgtatgaaagagcaactaaagca
gttttaccagaagaaatgtttgagctctttaacatttacatcaaaaaggccgctgaaatt
tatggtgtgccaaaaacacgacaaatatatgagaaagctatagaggtgctcacagaagaa
aatgcacgggaaatgtgtttgcgatttgccgagatggaaacaaaacttggtgaaattgac
agagcacgagccatttatgctcattgcagccagatgtgtgatccaagggtaacagcagac
ttttggcagacatggaaagaatttgaagtacgacatggaaatgaagatacaatgcgtgaa
atgttgaggattaaacgcagtgtccaagcaacttacaacacgcaggtgaatatgatgtct
gcccaaatgctgtctgcagccagtaatgtgtctggcactgtggcagatcttgcaccagga
gccaaggatggaatgagaatgttggaagcgaaagctgctcaaatggctcatttggagaga
cctgctcaacagcagccgaagggtggcaacatattgttcgtgcgtggagagacccagggc
atggatagagatggaactgacactactcgcgttattaatcctgacgagattaacatagac
tatgatgatgaggatgacgaagaagaggaaggagatgaggctgaacaagaggcagaagat
gatcttccagtgcaaaagcagccaattccgcaggaagtatttggaagtctgaagaagcca
gacgacgatgatgatgatgatgaagagaatgaataa
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