Periplaneta americana (American cockroach): 138704721
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Entry
138704721 CDS
T10946
Symbol
twin
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
pame Periplaneta americana (American cockroach)
Pathway
pame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138704721 (twin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pame03019
]
138704721 (twin)
Enzymes [BR:
pame01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
138704721 (twin)
Messenger RNA biogenesis [BR:
pame03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138704721 (twin)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
138704721 (twin)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_4
LRR_8
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
LRR_9
Motif
Other DBs
NCBI-GeneID:
138704721
NCBI-ProteinID:
XP_069688985
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All DBs
Position
8:51843934..52538725
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AA seq
548 aa
AA seq
DB search
MSRNHKDKYENTNPRRTHTIMSSEDAAAGKKSHWPELEITGTIRNLSPNLWKLTHLTSLY
LNDNCLSRIPPDISRLVNLRTLDLSSNKLRSLPAELGELIYLRELHLNNNHLRVLPYELG
KLFQLHVLGLQGNPLTKEILTLYGEPNGTHKLLTYMLDNLQVTASNPPQRPWIPLTRPNR
TRPTCIFTVMCYNVLCDKYATRQMYGYCPSWALEWEYRKKGILDEIRHYAADIISLQEVE
TSQFYNFFLPELKRDGYDGIFSPKSRAKTMAENERKFVDGCAIFYRTAKFSLIKEHLVEF
NQLAMANAEGSDNMLNRVMPKDNIGLAALLKTKEAAWDNGLPPDISQVHQPILVCTAHIH
WDPEFCDVKLIQTMMLSNELRSILEEASHNFRPGHKPDTNNIQLLLCGDFNSLPDSGVIE
FLTSGRVPADHKDFKSLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDIMPFTNYTFDFK
GIIDYIFYSKQSMTPLGLLGPLAPEWLRENKVVGCPHPHVPSDHFPLLVELEMTPTVPAS
SNGLIPRR
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcaatcacaaggataagtatgaaaataccaacccgcgtcgcactcacaccatc
atgtcaagtgaggatgcagctgctggaaagaaatctcattggccggaattggagataaca
gggactattagaaacttaagcccaaatctgtggaaacttacacacctgacatcgttgtac
ctgaatgacaactgcctttcgcgaatcccgccggacatctcgaggttggtcaacttacga
acccttgacttgtccagtaacaaactgcgtagcctgccggctgaactcggagaactcatc
tacctcagggaactccatttgaacaacaaccatcttcgtgttctcccatacgaattggga
aaattgtttcagcttcatgttctgggtctacagggaaatcctctaacgaaggagatcctc
acgctttacggtgagcccaatggcacccacaaacttctcacctacatgctggacaattta
caagtgacggcgtcaaatcctccgcagaggccatggattccacttacgcggccaaatagg
acgagacccacgtgtatattcactgtgatgtgctacaacgtcctttgtgacaagtacgcc
accagacaaatgtacgggtactgtccgagctgggcgcttgagtgggaatataggaaaaag
ggcattttggacgagatccggcattacgctgcggatattatcagtctccaggaggtggaa
acaagtcaattttacaattttttcctgccagaattaaaacgggatggctatgacggcata
ttctcccctaagtctcgagctaaaacgatggctgagaatgaaaggaaatttgtcgacgga
tgtgccatcttttatcgaacagcaaagttctcactcataaaggaacatctggtggaattc
aaccagctggcaatggcgaacgcagagggttctgacaacatgctgaatagagtaatgccc
aaggacaacatcggacttgctgcattacttaaaacgaaggaggcagcatgggataatgga
ctaccaccggatatcagtcaagtacatcagcccatcttggtgtgtacagctcatattcat
tgggatccagagttttgtgatgtgaaattaatccagacgatgatgctgtccaatgagcta
cgcagtattttggaagaggcaagccacaattttcgtccagggcacaaacccgatacaaat
aatatccagttattattatgtggagattttaactccttacctgattcaggagtcattgaa
ttcctgacctcggggcgcgtacctgctgatcacaaagacttcaagtccctagcctacaag
tcttgcctgcaaaagatctcaggctgtgacaaaccaaatgagttcacacattccttcaag
ctggcctcagcatacagtgaagacattatgccatttacaaattacacgtttgattttaag
ggtattattgattacatcttctactctaaacagagtatgactcctttaggcctcttgggg
cctttagctcctgagtggttaagggaaaacaaagtggttggatgtcctcatccgcatgta
ccatcagaccatttccctctcctggtggaactggaaatgacacccacagtgcctgcctct
tccaatggactaatcccacgaaggtag
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