Periplaneta americana (American cockroach): 138704807
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Entry
138704807 CDS
T10946
Symbol
DNAlig1
Name
(RefSeq) DNA ligase 1 isoform X1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
pame Periplaneta americana (American cockroach)
Pathway
pame03030
DNA replication
pame03410
Base excision repair
pame03420
Nucleotide excision repair
pame03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138704807 (DNAlig1)
03410 Base excision repair
138704807 (DNAlig1)
03420 Nucleotide excision repair
138704807 (DNAlig1)
03430 Mismatch repair
138704807 (DNAlig1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pame03032
]
138704807 (DNAlig1)
03400 DNA repair and recombination proteins [BR:
pame03400
]
138704807 (DNAlig1)
Enzymes [BR:
pame01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
138704807 (DNAlig1)
6.5.1.6 DNA ligase (ATP or NAD+)
138704807 (DNAlig1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
138704807 (DNAlig1)
DNA replication proteins [BR:
pame03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
138704807 (DNAlig1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
138704807 (DNAlig1)
DNA repair and recombination proteins [BR:
pame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
138704807 (DNAlig1)
NER (nucleotide excision repair)
Other NER factors
138704807 (DNAlig1)
MMR (mismatch excision repair)
Other MMR factors
138704807 (DNAlig1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
FERM_N_2
Herpes_LP
Motif
Other DBs
NCBI-GeneID:
138704807
NCBI-ProteinID:
XP_069689180
LinkDB
All DBs
Position
8:69496223..69554625
Genome browser
AA seq
944 aa
AA seq
DB search
MIKSCKPRNVWFFFTSVVNHRYRSNALPICGKAAITRCLTASNNIWLYLKPVNVCLSCCP
PSNPDGSEAVRKDSPVKVTPSTKKKRRRVLSDSDEDEGTSASSSPPPEKKASESPSSPGK
KNKKTNVSPKGVPRRKTAPAPDRGAKELLPGIAKVIEANKASQTQTKDDEDVRDKDTTHE
NQEASPSKEEKSESTNHTSENMEKEETAEECQNLKENHVKAEDKSDEMDTKEMNGKESPS
KKPVHSFFAPRKTGTDKEKKKTSSTKDNSSGSVSDSKSTTKNETSKDAGVNYDPTKSNYH
PIDNAFWSRGERVPYLALAKTLEAIEGVSARLKIIEILANYFRSVMVLTPEDLLPSVYLC
LNKLAPAYEGIELGIAETTLMKAIAQSTGRSVGQIKSDANATGDLGIVAEQSRSNQRMMF
QPAKLTVQSVFSKLKDIAQMTGHASMSKKVDKIQAMFVACRYSEARFLIRSLAGKLRIGL
AEQSVLQALALACATTPPGQSYPPEVINASKGMSQEAFKSRVDEEALILKTTYCECPNYN
KIIPVLLEQGIKALPDHCHLTPGIPLKPMLAHPTKGVQEVLHRFENQKFTCEWKYDGERA
QVHFAEDGTVNIYSRNQENNTSKYPDVIGRLPNALGDGITSCILDCEAVAWDKEKQQILP
FQVLSTRKRKDANEAEIKVQVCVFMFDLLYLNGKALVREPLIKRRSLLLEHFREVEGQFK
FATRIDTSTMEEVQDFLEESVKGNCEGLMVKTLEEDATYEIAKRSRNWLKLKKDYLEGAG
DTLDVVILGGYLGRGKRAGTYGGFLLACYDQDNEEYQSLCKIGTGFSDEDLQKHTEFFKQ
HLIPQPRPYYRYDSQHEPDHWFDAVQVWEIKCADLSLSPVHRAAIGIVDPVKGISLRFPR
FLRIRDDKAVEDATTASQVAEMYGSQEQIKNQQTTNKVTEEDFY
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatcttgtaaaccaaggaatgtttggtttttctttacatctgtcgttaatcat
agatatagaagtaatgcactacctatttgtggtaaggcagcaattacaagatgtttgacc
gcatcaaataacatttggttgtatttaaaaccagtgaacgtatgtttatcttgctgccca
cctagcaatccagatggatcagaagcagtcagaaaggactctccagttaaagtgacaccc
tcgacaaagaaaaagaggcgtagagttctgagtgacagtgatgaagatgagggaacttcc
gcaagttcatcaccaccaccagagaagaaagcatctgagtctccttcgagtcctggaaag
aaaaataagaaaactaatgtttctcctaaaggagtaccacgaagaaaaacagctccagca
ccagatagaggagcaaaggagcttcttccgggtattgccaaagtaattgaagcaaataag
gcatcccagactcaaaccaaggatgatgaagatgtcagagacaaagatacaactcatgaa
aatcaggaagcttcacccagtaaggaggaaaaaagtgaaagtactaatcatacctcagaa
aatatggagaaagaggagactgctgaggagtgtcaaaatttgaaagaaaatcatgtaaag
gcagaggataaatcagatgaaatggacaccaaagagatgaatggaaaagaatcaccatca
aagaaaccagttcacagcttttttgcacctcgtaaaaccggtacagataaagaaaaaaag
aaaacctcatccacgaaagacaatagttccggttctgtaagtgatagtaaaagtacaaca
aaaaatgagacttctaaggatgctggtgtaaattatgatcctacaaagtcaaattatcat
ccaatagataatgcattttggagtagaggagagagagtgccatatcttgccttggccaag
actctggaagcaattgaaggtgtttctgctcggctcaagattatagaaatcttggcaaac
tattttcgttctgtaatggttctcactccagaagacctactgcctagtgtttacctctgc
ctcaataagctggcccctgcatatgaaggtattgaactcggcatagcagaaactactcta
atgaaggctattgcccagagtactggaagatctgttggtcaaataaagtcggatgctaat
gccacaggagacttaggcattgtggcagagcagagccgcagcaaccaacgcatgatgttc
caacctgcgaaactcactgtacagagtgtgttcagcaagttaaaagacatagcacagatg
acaggtcatgcttcaatgagcaagaaggtggataaaattcaggcgatgtttgtggcttgt
cgatattctgaagcccgtttcctcattcgttcacttgctggaaagctgcgcattggatta
gctgaacagtctgtattgcaggcccttgctctggcatgtgctacaacacctccaggacag
tcataccctcctgaagttatcaatgcatctaagggaatgtcacaggaagcattcaaatcg
cgagttgatgaggaagcattaatactgaagacaacatattgtgaatgtccaaactataat
aagataattccagtgctgttagaacaaggcattaaggccctgccagatcattgtcacctc
actcctggaatcccattaaaaccaatgttggcgcatcctactaaaggtgttcaggaggtg
ttacatcggtttgagaatcagaaattcacgtgtgaatggaaatatgatggtgaacgagca
caggtgcactttgcagaggatggaacagtgaatatttacagtcgcaaccaagaaaataat
accagcaaatatccagatgtaatagggcgacttcctaacgcattgggtgatggtattact
tcttgtatcctggattgtgaagctgttgcatgggacaaagaaaagcaacaaatcttacca
ttccaagttcttagcacaagaaaaagaaaggatgcaaatgaagcagaaataaaagttcaa
gtttgtgtcttcatgtttgatctcttgtacttaaatggcaaagcacttgtccgggaacct
ctgattaagagacgtagtttgctacttgagcatttccgtgaagtggaggggcagtttaaa
tttgcaactaggattgatacctcaaccatggaggaagtacaagatttcttagaagaatct
gttaaaggtaattgtgaaggtttaatggtaaagacactggaagaagatgctacctatgaa
attgccaaaaggtcacggaactggttgaagctgaagaaagattatcttgaaggtgcaggg
gatacattggatgtagtgattttgggtggctacttggggcgtggaaagagagctgggaca
tatggtggtttcttattggcctgttacgaccaggacaatgaagagtatcaaagcttgtgc
aagattggtacaggattcagtgatgaggatcttcagaaacacacagaattcttcaagcag
catttgataccacaaccacggccctattatcggtatgacagccaacatgaaccagatcac
tggtttgatgcagtgcaagtttgggagataaaatgtgcagacttgtctctgtcgcctgtt
catcgcgctgctataggaattgttgatccagtgaaaggaatttcattgcgtttccctcga
tttttgaggatacgtgatgataaagcagtcgaagatgctactactgcatcacaggtggct
gaaatgtatggtagccaagaacagataaagaatcagcaaactacaaataaggtcacggaa
gaagacttctactag
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