| Entry |
|
|---|
| Symbol |
DNAlig3
|
|---|
| Name |
|
|---|
| KO |
|
|---|
| Organism |
pame Periplaneta americana (American cockroach)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:pame00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
138705890 (DNAlig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:pame03400]
138705890 (DNAlig3)
Enzymes [BR:pame01000]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
138705890 (DNAlig3)
DNA repair and recombination proteins [BR:pame03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
138705890 (DNAlig3)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
9:complement(46825897..47416581)
|
|---|
| AA seq |
966 aa
MSDDGGEDESQQDSKKFFVDRAKSGRATCKKCKEKLNSGDLRLAKSGYNPFGPGPMKMWH
HVSCLFDVFSRQRPTTAKIETPDDIEGWSDLEEEDQEEILKYLPKCKGWKPTPKEPKDDT
PKKTKVSSTKTSKEKEKEKDKDKDKEKEKDKDKDRDKEKKKDSGSSAKEGHKDDSFREFR
RLCAALSETQSYTGKTALVKEFFTKGTDGSSFKGDLNLWCRLLLPGAIKRVYNLQSKQLI
KLFSKILHTDQDDMLEDLEQGDVAETVRVFFEKSKHLSPTKKSNLSLQDVDKFLEELSGM
TKEDEQSYHFKQMAKKCTSNDLKMIIRLVKHDLRINAGPKHILEAVHPDAYQAFQTSQDL
DAVLAKAVVKTESGHSSPTKKTNIKITASVMTPVLPMLAEACKSVEYAMKKCPNGMYSEI
KYDGERVQVHKKGNEFKYFSRSLKPVLPHKINTFKDYIPKAFPYAKDLILDSEVLLVDVK
TGKPLPFGTLGVHKKHAFKDANVCLFVFDCIYYNGEMLLEKPIKERRRILEENMEEVPNR
IMFSEMEEIHAPKDLANMITKVLKLGLEGLVLKDLMSIYEPGKRHWLKVKKDYLFGGAMA
DSADLVVLGAWFGTGQKGGMKSVFLMGCYDPDRKKWCTVTKVHTGHDDKTLERLQDELDM
IKISKEASKVPDWLLCTKTMIPDFVARDPEEMPVWEITGAEFTQHEVHTASGISIRFPRV
TKIRCDKTWKTATSLPELKVLFKNSKENMDFSIPSTSYGGNDDDDTSSTSTSRGNEVDSP
SSTPKKAPPQSKISSILFKNKISAASKVSNTKKHKQEPGNKTSDDESNTITPNNASDADS
EANEENNNGESPAKKRKKSDSSDKMQYQINKPLPDVFGGVKLVLPDSVKENRCELERYFI
AYGGELLSRSQIDECTHVIHINNSALKDDEGDTWPREARHVALRWLWDSIKLQELQEPRS
YAVRKA |
|---|
| NT seq |
2901 nt +upstreamnt +downstreamnt
atgtcagatgacggtggcgaagacgaatcacagcaggactcgaagaaattcttcgttgat
cgtgccaagtctggccgggcgacatgcaagaaatgcaaggagaaactgaactctggcgat
cttcgactggccaaatccggctacaaccccttcggcccaggtccaatgaagatgtggcat
catgtcagctgcctcttcgatgttttctctcgtcagaggcctactacggccaaaatcgag
actccagacgatatagagggttggagcgacttggaagaagaagaccaagaagaaatactc
aagtatttgccaaaatgtaaaggatggaaacctacaccgaaagaacctaaggacgataca
cctaaaaagacaaaagtatcatcgacgaaaacgtcaaaagagaaagagaaggaaaaagac
aaggacaaggataaggagaaagagaaagacaaagataaagacagggataaagagaagaag
aaggactcgggatcatcggccaaagaaggccacaaagatgattctttcagggagttcagg
agattgtgcgctgccttgtcggagacacaaagctacaccgggaagaccgcgctggtcaaa
gaatttttcactaagggcaccgacggctcaagtttcaaaggagatctgaatttatggtgt
cgtctcttgctgccaggcgcaataaagcgtgtgtacaacttacagagcaaacaacttatc
aagctcttcagcaagatactccacacagaccaggatgatatgttagaagatctagaacaa
ggagatgtggctgagacagttcgagtctttttcgagaagagcaaacacctttcacctaca
aaaaagagcaacctttcattgcaagacgttgacaaattcttggaagaattatcaggaatg
accaaggaagatgaacagagttatcattttaaacaaatggcaaaaaagtgcacatccaat
gacttgaagatgatcattcgactggtgaaacatgacctccgtattaatgctggacccaaa
cacattttagaggctgtgcatccagatgcatatcaagcattccaaacatcacaagactta
gatgctgtccttgcaaaggctgttgtgaagacagaaagcggtcacagttcacctacaaag
aagacaaatataaaaatcactgcctcagtaatgactcctgtgcttcccatgctggctgaa
gcatgtaagtcggttgaatatgcaatgaaaaaatgcccaaatggaatgtattcggaaata
aagtatgatggagaacgtgtgcaagtgcataagaaaggaaatgagtttaaatatttctca
cgaagtttgaagccagttctaccacataagataaataccttcaaagactatattccgaaa
gcatttccatatgctaaggaccttattcttgacagtgaagtgctactagtggatgtgaaa
acaggaaaaccactgccatttgggactttgggtgtacataagaaacatgcctttaaagat
gcgaatgtgtgccttttcgtttttgactgtatatactacaatggtgaaatgttgcttgaa
aaaccaattaaagaaagacgacgaatattagaagaaaatatggaagaagttccaaatcgt
atcatgttttcagaaatggaagaaattcacgctccaaaagacttggcaaatatgatcaca
aaggtgctaaaacttggacttgaaggcttggtactgaaggacttgatgagtatttatgaa
cctggcaagagacactggctgaaagtaaagaaggactatctgtttggaggtgcgatggct
gactctgcagatctggtagtacttggggcttggtttggaactgggcagaaaggtggtatg
aagtctgtatttttgatgggttgttacgatcctgatcgtaagaaatggtgcactgttacc
aaggtccacacaggacatgatgataaaacattggaaagattacaggatgaactggatatg
attaagatcagcaaagaagcgtctaaagtacctgattggcttttgtgcaccaagacaatg
attccagattttgtagctagagatcctgaggaaatgccagtgtgggaaataactggtgca
gaatttactcagcatgaagttcacacagcgtctggcatatctataaggtttcctcgggtt
actaaaattcgttgtgacaagacatggaaaactgcgacatcacttcctgaactaaaggtc
ttgtttaagaattctaaagaaaatatggacttctcaataccatcgacgtcatatggtgga
aatgacgatgacgacacttcaagtaccagtaccagcagaggaaatgaagttgattcacca
tcctcaactccgaagaaggcacctcctcaatcaaaaatttcaagcatcttgtttaaaaac
aagatatctgcagcaagcaaagtttcaaatactaagaaacataaacaggaacctggtaat
aagacatcagatgacgaaagcaacacaataactcctaataatgccagtgatgctgacagt
gaagcaaatgaagagaataataatggtgaatcaccagcgaaaaagagaaagaaaagtgat
tcaagcgacaaaatgcaatatcagattaacaagccactgccagatgtgtttggaggtgta
aaattagttctgcccgactcagtaaaggagaaccggtgcgaattggaacgttacttcatt
gcatacggcggagagctgctgtccaggtcgcagatagatgaatgcacccatgtcatacat
attaacaactctgccttgaaggacgacgagggagacacgtggccgcgcgaagctcgacac
gtggccttacgttggttgtgggactccatcaagctgcaggagttgcaagagccgcgcagc
tacgccgtcaggaaagcctga |
|---|
