Periplaneta americana (American cockroach): 138706584
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Entry
138706584 CDS
T10946
Symbol
dor
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pame Periplaneta americana (American cockroach)
Pathway
pame04140
Autophagy - animal
pame04142
Lysosome biogenesis
pame04145
Phagocytosis
pame04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pame00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
138706584 (dor)
04142 Lysosome biogenesis
138706584 (dor)
04140 Autophagy - animal
138706584 (dor)
04148 Efferocytosis
138706584 (dor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pame04131
]
138706584 (dor)
Membrane trafficking [BR:
pame04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138706584 (dor)
Hops complex
138706584 (dor)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
zf-C3HC4_2
Clathrin
zf-C3HC4
zf-RING_11
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3H2C3
zf_RING_Vps8
zf-RING_Vps41
COG6_N
zf_RING_Vps8_fungal
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
138706584
NCBI-ProteinID:
XP_069692174
LinkDB
All DBs
Position
9:143654656..143945745
Genome browser
AA seq
983 aa
AA seq
DB search
MTSMFDQYEQASQRFKGTMGPTIRPEMSTTGFIHMKLEEEAPMFSKQKVNFSPTDRITHL
AVSSELLVLTMANNVLLRIDLRHPDKPEEIELGKYMSHLKLSGVFLDPLGHHLLLSLSSR
NTETPAELLYLSRKTSKLKQPSKFKGHEVTAVGWNFGNDSDGTTGPILLGTSKGLIFETE
ICLEGDRIFQSSLEQYWRQLPSYLPLYGTREVDGLVFDIGKGNNTPITGLEFHRVPGSEK
YFVLVTTPNRLYQFIGYVSNSDEKPLLQQIFNSYLTVPEGFQEIPSSLKYSKLQFYYPNA
KGLPKTFAWLTEPGIFYGQLDTSGHDSVLTNSQLLQYIPPNSGAPIAFVITEFHALLLYA
DHVKGISLLNHELVFEDIYNESFGKLVNIVQDPIKGTLWAFTEKAVFRYKVSREERNVWQ
IYVEKGEFELAKQYCKDNPAHIDQVLVKQAEMFFNNKQYEKSAVHYAETQSSFEEIALKF
LQVWQIEALKTFLKKKLEGLRIQDKTQITMIVIWVIELFLNQLGSLRDEGKENTTEYITL
QKELDSFLARPQVIECVKNNKGTVYDLMASHGDKQNLIKLTIINKDFERVIRHHIYKNNY
LEALDVLKSQNRKELFYAFAPSLMPFVPKQMVNALISQGRSLNPSSLIPALVTLDDDQAV
EAIRYLEFCVNSLGCQQEAIHNFLLSLYARLKPENLMEYLALQGQDPNMVRYDIRYALRL
CQERNLTEACVQLSALLGLWEAAVDLALSIDVNLAKMTASMPQNDPELRKKLWLKIAKHV
VREKDDIQQAMQFLQQCELIKIEDILPFFSDFVTIDHFKDAICTSLQEYNQHIQDLKEEM
EEATKSAQVIREEIQTFRNRYAFVQARDVCSICDLQLLMRPFYLFPCGHRFHSDCLLTEL
SPMLPSGKKNKLHDLQRQLAAFSSRDDNVSMGSATMSARDQVKADIDSIIASECLYCGEM
MIRSIDRPFIEDEDYERVMKEWE
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgacttctatgttcgaccaatatgaacaagcttcacagcgtttcaaagggacaatgggt
ccaacaattcgtcctgagatgagcacaacagggttcatacacatgaagctggaggaagag
gcaccaatgtttagtaagcagaaggtgaacttctcaccaacagatcgcataactcacctg
gcagtgagcagcgaacttctggttctcaccatggctaataatgtacttctgagaattgat
cttcgtcatcctgataaacctgaagagattgaacttggaaaatatatgtcacacttgaaa
ttgagtggggtgttcctagatccacttggacatcatttattgctgagtttatcctccagg
aatacagagacgcctgcagagctcctttacctgtctagaaaaaccagtaaactcaaacaa
cctagcaagtttaaaggtcacgaagtgactgctgtgggttggaattttggaaatgactct
gatggtacaacaggtccaattttactaggtacctccaagggactcatatttgaaaccgaa
atatgtctggaaggtgacagaatcttccagtcaagtttagagcaatattggagacagctg
cctagttatctgcctttgtatggaacaagagaggtggatggtctggtgtttgatatagga
aaaggaaacaacacacccatcacagggttggaatttcaccgtgttcctggatcagaaaaa
tattttgtccttgtaacaactcccaaccgtttgtatcagtttattggttatgtgtcaaat
tcagatgagaagccactcttgcaacagatcttcaatagctacctcactgttccagagggc
ttccaggaaattccaagctctctgaagtactctaaacttcaattttattatcccaatgct
aaaggactgccaaaaacatttgcttggttgacagagcctggaattttctatggacagttg
gacacgagtggacacgattctgttttgacaaatagccagctactgcagtacatcccacca
aattctggtgcaccaattgcatttgtaatcactgaatttcatgctctgctgctgtatgcc
gatcatgtgaagggcatatcacttctcaatcatgagcttgtgtttgaggacatctacaat
gagtcatttgggaagctggtgaacatcgtgcaggaccctatcaaaggcacactctgggca
tttacagagaaagcagtatttcgttacaaagtgtcacgtgaagagagaaatgtctggcaa
atatatgttgagaagggcgagtttgagctcgccaaacagtactgcaaggacaatcctgct
catattgaccaggttctcgtcaaacaagctgaaatgttctttaacaacaaacagtatgag
aagagtgctgtgcattacgcagaaacacagtcatcatttgaagagattgctctcaagttc
ttgcaagtgtggcagattgaggcattgaaaacattcctgaaaaagaaattagaaggctta
agaattcaggacaagacgcaaataacaatgattgtcatctgggtgatagaattgttttta
aatcagttgggatcattgagagacgaaggcaaggagaacacaactgaatacattacttta
cagaaggagcttgattcgtttcttgcacgtccacaggttatagaatgtgtgaagaacaat
aaaggaacagtctacgatttgatggcaagtcatggtgacaaacaaaatctcattaaattg
accattatcaacaaagactttgaacgagttattcgtcaccatatttacaagaacaactat
cttgaagctctggatgtattaaagagccagaataggaaagaacttttctacgcatttgca
ccttcccttatgccatttgtgcccaagcagatggttaacgctctcatcagccaaggacgg
agtttgaatccttccagtttgatacctgcgcttgttactctggatgatgaccaagctgtt
gaagcaatcagatatttggagttctgtgtcaattctttaggatgccagcaggaagcaata
cacaacttcttgctctcattgtatgcaagactcaagccagagaacctcatggaatacctt
gcattacaaggtcaggatcccaatatggtccgttatgacatccgctatgcactgcgtttg
tgtcaagagaggaacttgacagaagcctgtgtgcagttgtcagctcttctgggtctgtgg
gaggcagctgtcgaccttgcactttcaatcgacgtaaacttggccaagatgaccgccagt
atgccacagaatgatcctgaactgaggaagaaactctggttgaagattgccaagcatgtg
gttcgggaaaaggatgacatccagcaggcgatgcaatttcttcagcaatgtgaactcata
aaaattgaagacatcttgccattcttctcagactttgtcaccatcgatcacttcaaagat
gccatatgtacttctcttcaggagtacaaccaacacattcaagatctcaaagaagaaatg
gaagaggctaccaaatcagctcaggttatcagagaagagatacagactttcagaaatagg
tatgcatttgtgcaggcacgagatgtgtgttcaatatgcgacctgcaactcctcatgaga
ccattctatctcttcccatgtggccatcggttccactctgactgcctgttgactgaactc
agtccaatgttgccgtcaggcaagaagaacaagctgcatgacttgcaaagacagttggcc
gcattttcttctcgagacgataatgtatctatggggtcagcaacaatgtcagcacgagat
caagtgaaggcagatattgacagtatcattgcatctgagtgtttgtactgtggtgaaatg
atgattaggtccatagatcggccatttattgaagatgaagattatgagcgagtaatgaaa
gaatgggaatga
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