Periplaneta americana (American cockroach): 138709133
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Entry
138709133 CDS
T10946
Symbol
Csl4
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
pame Periplaneta americana (American cockroach)
Pathway
pame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138709133 (Csl4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pame03019
]
138709133 (Csl4)
Messenger RNA biogenesis [BR:
pame03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138709133 (Csl4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
138709133 (Csl4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
138709133
NCBI-ProteinID:
XP_069695771
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Position
11:complement(80524278..80551929)
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AA seq
197 aa
AA seq
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MENTDLVCIPGQRLCLADKEHISGCGTYERNGYIYSTLAGVVNVVKEEKSSTIEVHSSKE
QSIVPAPGDIVTAKVTIVNQRFCKCVIKCISDTVLTRPYRAVLRKEDVRATEKDRVEMIK
CFRPGDIILARVLPMTEVHTYQLTTAENELGVVIAHSESGAAMVPISWTEMQCPKTYVKE
PRKVAKVVPENVNVDSS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacacagatttagtgtgtattcctggacaaaggttatgtctggctgacaaggaa
cacatttctggttgcggaacatacgaaaggaatggttacatatactctacgcttgctgga
gtggtcaatgttgtaaaagaggagaagtcttcaaccattgaagtgcatagcagtaaagaa
cagagtattgttccagcacctggagatatagttacagccaaggtgacaatagtgaatcag
aggttctgcaaatgtgtcataaagtgtataagtgatacagttttgacacgaccttaccga
gcagttttacggaaagaagatgtacgtgctacagagaaggatcgagtggagatgataaag
tgtttcaggccaggtgatattatcttggccagagttcttccaatgacggaagttcataca
taccaattaacaacagcagaaaatgagcttggtgttgtcatagctcacagtgagtcaggt
gctgcaatggttcccataagctggacagagatgcagtgtccaaaaacttatgtcaaagaa
ccacggaaggttgcaaaggttgttccagaaaatgttaatgttgattctagttaa
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