Periplaneta americana (American cockroach): 138710800
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Entry
138710800 CDS
T10946
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7-like
KO
K14409
protein SMG7
Organism
pame Periplaneta americana (American cockroach)
Pathway
pame03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pame00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138710800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pame03019
]
138710800
Messenger RNA biogenesis [BR:
pame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
138710800
mRNA cycle factors
Common to processing body (P body) and stress granule
138710800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_8
TPR_2
Motif
Other DBs
NCBI-GeneID:
138710800
NCBI-ProteinID:
XP_069698024
LinkDB
All DBs
Position
12:109387512..109436660
Genome browser
AA seq
1119 aa
AA seq
DB search
MGLKAAIQALKRAEKLKEKVQSSRDLLNDNEAWVCQQQLQRIYQQVLILDLEYALDRKVE
QELWNHGFKNYIGTLQNLAKDKKNPKRNESQAMLSWCLEAASGFYLTLLQEICTAFDLDL
PFRRKESVYGNGKLWRTVDHFTQPHKNSCYYICQHCLVHLGDIARYRNQSRQAEIFYRHA
VQLAPNSGQPYNQLALLEASRGDRLSTVFHYVRSVAVRHFFPAAATNLSRTLNKSAEEQL
NVEGRSKLSVSEYVAVFLKLHGLLHNSSDLQEAEKYVRVLTTTLTAHVATESLTSWKLVQ
MLAINLFALHHAGSCVDADKLTSFSDEQLSSDERKVKHLVMDLMAGSLSAYLLPVYTLKE
GDALLEYFALPAIKLTLDWIRLDPKVLLESAFTSRLQIWPSLCKLLNGLQQALTDFTTDK
YSYLPLPEDRDLQGFIPLEKSFSDLRFSSQDWKLDPVSLNKLRASRVLEFGNWLSKQDNH
RLVTRSSPGADESAAVFEAVGGQQVPPCDLIRELEELSLTKLPSPAPSDTSSWGSTATGT
STPDNSLIIGGILGGPHSPPLTRDIITEQPHIDTVVERRTGILKPQGSLEKAREKEATEV
TWNHNQNHSANVITKRGRQNVAMQAIMRKSVLLGEQENARNLEAKQVTFKTPSPSISPGS
SQGAEEGQIVKSNKPTAWQQSKQQQQQHHQVLHPLPQSSPQSLNINFPYQNQPASQHNLM
PQHSQVPRNQVSQVPSVFDNGELSHQNGILGALHHHNQSVPSNGSNLSSSFAPQIPSFPN
HPGQMPFHQISSPGTNLPLSDNSTSNIGSGYPPSHQSFGMKLRQPPFTPWQEESPPLPPQ
SWWRGDRQGLTRQGSGSSNQQDESVSSQTPGTQINLPFPAMNYVQGNILQQPVQRMSMKS
PTDLVTGDLYSSTNWHSRHQMSAPPPPLNLNINLQHQLMSGTSNQHPGNFTQPTATQASI
SRSLLRNNAGYQSSQNRPDVNQLSVFANSGNQETQRLNSEVSDCTSKENQPNSSVTGAEN
STIFSSTPNTSSFSALGLGTNTYSLFSTPSWVSPAPTCGLELEGNSCGNGLSSVMGVPGN
NSLSIGQQSLWSGPGPSPLERLLEQQKQLREGPAPKGGT
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgggattgaaggctgccattcaggcattgaagagagcagaaaagttaaaagaaaaagtt
caaagttcaagagacttattgaatgacaatgaagcctgggtgtgccaacaacagttacag
agaatatatcagcaggtccttatccttgacttagaatatgcattggacagaaaagtggaa
caggaactatggaatcatggatttaaaaattacattggaacactacagaatttagcaaag
gataaaaagaacccaaaacgtaacgagtcacaagccatgttgtcttggtgtctagaagca
gccagtggcttttatttaacattactacaggaaatttgtacagcattcgaccttgacctc
cctttcagaaggaaggagtccgtgtatggaaacggcaaactttggagaacagttgatcat
tttactcaacctcataaaaattcttgttactatatttgtcaacattgcttagtccacttg
ggggatattgctcgctacaggaatcaaagtcgtcaggctgagatattctacaggcatgca
gtgcagttggcaccaaatagtggacaaccttacaaccaacttgcactccttgaagcaagc
cgaggtgacagattgagcacagttttccactatgttcgtagtgttgcagttcgtcacttt
tttccagctgctgccaccaacttgtcccgtacattgaataaaagtgcagaagaacagtta
aatgtagagggacgaagcaagttatcagtttctgaatatgtagctgttttcctcaaactt
catgggttacttcataacagttcagatctacaagaagcagagaagtatgtgagagttctg
acaacaacacttacagctcatgttgctacagaaagccttacttcatggaagttggttcag
atgttggctatcaacctgttcgccctacaccatgctggaagttgtgttgatgcagataaa
ttaacctcattcagtgatgagcaattgtcaagtgatgaaaggaaagtgaaacatcttgtg
atggatcttatggctggatctctcagtgcttatttgttaccagtgtacacactcaaagaa
ggagatgctttactggaatacttcgctctacctgctattaagctgactttagattggatt
agacttgatccaaaggttctgcttgagtcagcatttacaagtcgacttcaaatctggccc
agcctatgtaaactcctaaatggactccagcaagctctgactgattttactacggataaa
tatagctacttgcctcttccagaagacagagacctgcaaggattcataccactggagaag
tcattcagtgatcttagattcagttcccaggattggaaattggatccagtctccctaaat
aaactccgagccagtcgtgttcttgaatttgggaactggctgtccaagcaggataaccat
cgtcttgtaactagatcatctccaggtgcagatgaatctgctgcagtgttcgaagcagtg
ggaggccaacaggtgcctccttgcgacctgatcagagagctagaggaactgagtctcaca
aagctcccctcccctgctccatctgataccagtagttggggaagcactgctactggcaca
tccaccccagataattccctaataattggaggaatccttggaggcccacacagtcctcct
ctcactcgtgacattattacagagcaacctcatattgatacagttgttgaacgccgtact
ggtattttgaaaccacaaggctccttggagaaggctcgagagaaagaagcaactgaagtg
acatggaaccataatcagaatcattctgcaaatgtaataaccaagcgaggccgacagaat
gttgcaatgcaagctatcatgaggaaatctgtattgcttggagaacaagagaatgcgaga
aatttggaagccaaacaggtgacatttaaaactccttcacctagcatatcacctggaagt
tctcaaggtgcagaggaaggacaaattgttaaatcaaataaaccaacagcatggcaacaa
tcaaaacaacaacagcagcagcatcatcaggttctccatcctcttcctcaatcatcccca
cagtccttaaatataaatttcccgtaccaaaatcaaccagcatcacagcataacttaatg
ccgcagcatagccaagtccccagaaatcaggtatcccaagtcccatctgtctttgataat
ggtgagttgtcccatcaaaatggtatcttgggtgccctgcatcaccacaaccaatcagtt
ccgtctaatggcagtaacctgtcatcttcatttgcccctcaaattccttcattcccaaac
catccaggtcaaatgccttttcatcaaatttcttctcctggaactaacttgcccctcagt
gataattcaacttcaaacattggtagtggatacccaccatcccaccagtcatttggaatg
aagttgcgtcaaccgccatttacaccatggcaagaagagagtccacctctcccacctcag
tcttggtggcgaggcgatagacagggattaacaaggcaaggttcaggaagcagtaaccaa
caggatgagtcagtatcatcacaaactcctggaactcaaataaacttgccctttccagca
atgaactatgttcaaggaaatatacttcagcaacctgttcaacgtatgtccatgaaatct
ccgacagatttggtaacaggagatctgtacagcagcacaaattggcattcaagacatcag
atgtcagcaccaccaccacctctaaatctcaatataaatctgcaacaccagttaatgagt
ggaacatcaaaccagcatcctggaaattttacacagcctactgctacacaagcatccatt
tcaaggtctttgttgagaaataatgcagggtaccagagttctcaaaacagacctgatgtc
aaccagttgtctgtatttgccaattcaggaaaccaggaaacacaaagactaaattcagag
gtatcagattgcaccagtaaggaaaaccaaccaaacagctcagtgactggtgcagaaaac
tccaccatattttcatcgacgccaaacaccagttccttttctgccctgggattgggtact
aatacatactccctattcagtactccaagttgggttagcccagcacctacatgcggtctg
gagttggaaggcaactcttgtggaaatgggttatcaagtgtcatgggtgttccaggcaac
aactcccttagtattggacagcagtctctatggtctgggccaggtccgtcaccattggag
agactactggagcagcaaaagcaattgagggagggcccagcccccaagggtggaacttga
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