Periplaneta americana (American cockroach): 138711784
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Entry
138711784 CDS
T10946
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
pame
Periplaneta americana (American cockroach)
Pathway
pame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138711784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pame03041
]
138711784
Enzymes [BR:
pame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138711784
Spliceosome [BR:
pame03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
138711784
Complex B
138711784
Complex C
U2 SnRNP specific factors
138711784
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
MscL
PRIMA1
Motif
Other DBs
NCBI-GeneID:
138711784
NCBI-ProteinID:
XP_069699088
LinkDB
All DBs
Position
13:31530803..31603954
Genome browser
AA seq
755 aa
AA seq
DB search
MSYNRGGDGKPRGFGFSGFQLKRDRASQLPPPPSSAISKHGYSTMSAISQNALAASYGLP
RKRSKTEEEYFDEDDEHVAPASTLEYIPAPGSPSYQPQGGQSSDSEEDPLDAFMAGIERQ
VQRETDKIQEKEDKKKGIRDDIEEEDVEESYYRYMEENPLAGVQNDDSDQEIEYDEDGNP
IAPKKSKEIDPLPPIDHSEIDYIDFEKNFYNVHEDIAGLAQNQMEELRQKLGIKVTGALP
PHPVSSFAHFGFDEALMKAVRKSEYTQPTPIQAQAVPAALSGRDMIGIAKTGSGKTAAFI
WPMLVHIMDQKELQPGDGPIGLILAPTRELSQQIYTEAKKFGKVYNIQVVCCYGGGSKWE
QSKALEGGAEVVVATPGRMIDLVKMKATNLQRVTFLVLDEADRMFDMGFEPQVRSICNHV
RPDRQTLLFSATFKKKVERLARDVLTDPIRIVQGDVGEANTDVTQIVKLLSMGGAKWNWL
LNNIVQFMSAGSVLIFVTKKANAEELANNLKLKEFEVLLLHGDMDQTERNKVITQFKKKE
VSILVATDVAARGLDIPHIRTVVNFDVARDIDTHTHRIGRTGRAGEKGTAYTLVTDKDKE
FAGHLVRNLEGANQEVPQNLLDLAMQSAWFRKSRFKSGKGKKVNVGGRGLGYRERPGLGS
SDNQSNSGMVPSNIAELIPKPVRTGPGTDRLSAMKAAFRSQYMSQFTASSDHTWEQTIDQ
PQPPLPPPPPPPPPPSDTGTVKSERRVKKSRWDNS
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgagttacaatcggggtggtgacgggaaacctcgcggttttgggttttctggattccaa
ttaaagcgagatcgggcaagccaattgccgcctccaccatcaagtgcaattagcaaacat
gggtactcaacgatgtctgctatcagccagaatgcacttgctgcaagttatggtttgcca
agaaagagatctaagacggaggaagagtattttgatgaggatgatgaacatgttgcaccg
gcttccactctggagtacattccagcacctggcagtccttcatatcaacctcaaggtggt
cagagctctgattccgaagaagatcctctagatgcattcatggctggtatagagcgtcag
gtacaaagagagactgataaaattcaagaaaaggaagacaaaaagaaaggaataagagat
gacattgaagaagaagatgtagaagaatcatactataggtatatggaggaaaatccttta
gcaggtgtccaaaatgatgattctgatcaagaaattgaatatgacgaagatggtaatcct
attgctccaaagaagagtaaagaaattgatcctcttcctccaattgatcattcagaaata
gattacattgactttgaaaagaatttctacaatgtgcatgaggacatagctggtcttgct
cagaatcagatggaagagttgcgtcagaagctcgggatcaaggtgacaggtgccttacca
cctcatcctgttagtagttttgctcattttggtttcgatgaagccctgatgaaagcggtt
cgtaagtctgaatatactcaaccaaccccaatccaagctcaggctgttccggcagctctc
agcggacgagatatgataggcattgcaaagactggtagtggtaaaacagcagcatttatt
tggcccatgttagttcatattatggatcagaaagaacttcaaccaggagatggacccatt
ggattgattcttgctcccacaagagaattgtcacaacagatatatactgaagccaagaag
ttcggtaaagtttacaatatacaagttgtttgttgctatggtggtggttccaagtgggaa
cagtcaaaagctctcgaaggtggagcagaagtcgtagtggcaacccctggtcgtatgatt
gacctcgtcaagatgaaggctacaaatctacaaagggtgacatttttagttctagatgaa
gcagatcgaatgtttgatatgggttttgaaccccaagttcgatctatctgtaatcatgtg
agacctgatcgacagacactgctcttcagtgcaacattcaaaaagaaagttgaacgactt
gcaagagatgtgcttacagatcccatcaggatagtccagggtgatgttggtgaagccaat
acagatgtgacacagattgtaaagctgttatcaatgggaggagcaaaatggaattggttg
ttaaataacatagttcagtttatgtcagcaggcagtgtcctcatcttcgttacaaagaag
gcgaatgctgaggaacttgctaacaacctgaaactgaaagagtttgaagtacttctgctg
catggagacatggatcaaactgagaggaacaaagtcattacgcagttcaagaagaaagaa
gtgagcatcctagtagcaactgatgttgcagctcgtggactggacattcctcacatcaga
acggtagtaaactttgatgttgcgagagacattgacacccacacccacaggatcggcaga
actggtcgtgctggagaaaaaggtactgcttatacactagttactgataaggacaaagaa
tttgcaggacatctagtacggaacttagaaggtgcaaatcaagaagtaccccagaatctc
ttggatctggccatgcagagtgcgtggtttcgcaaatctcgttttaagagtggaaagggg
aagaaagttaatgtgggaggccgtggtctgggctacagagagaggcctggactggggtcg
tcagacaatcagtctaactcaggcatggttcctagcaatattgcagagctcataccaaag
ccagttcgcactggtcctggcacagatagactttctgcaatgaaggcagcttttagaagt
cagtacatgagtcagttcactgcatcatcagaccatacgtgggaacagacaatagaccag
cctcaaccaccattaccacctccgccaccaccaccaccgccaccttctgatactggaaca
gttaagtcagagagaagagtaaagaagagtcgttgggataactcgtag
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