Periplaneta americana (American cockroach): 138712612
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Entry
138712612 CDS
T10946
Symbol
PAN2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
pame Periplaneta americana (American cockroach)
Pathway
pame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138712612 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pame03019
]
138712612 (PAN2)
Enzymes [BR:
pame01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
138712612 (PAN2)
Messenger RNA biogenesis [BR:
pame03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138712612 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
138712612 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH_1
PAN2_N
RNase_T
UCH
zf-CCCH_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
138712612
NCBI-ProteinID:
XP_069700682
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All DBs
Position
13:164830441..164951802
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AA seq
1320 aa
AA seq
DB search
MEYPGLGHYDPSVTASSEEILMYDDGSAHYSVEEESYEISNEGFVATTEHFTEGYTEAEF
QETHTILADGGERFGVSAVAFDQEEELLWMGNQGGHVTSYYGPGLQKYTSFQVHANQEVR
HIHTFEDGILALTQTALRCQMRRGIPIFTHSSDNMQEMQCQLQISRDTLLMGGHQDKIIE
FNLSQGQETNLLHVGKNGCAILRQHPRFICAGDPAGRIDLRDPNTLQVEHTLEAHSGSLS
DFDVHGNLLVTCGFSNRQGNLSVDRFLMVYDLRMMRAVTPIQVMLDPLLLRFLPSFSSRL
VTVSTLGQIQLVDTVALSQPNLCLYQMNTAGSMCLALDVSSSCQCMAFGDGGGSIHFYTS
NPHTAMFNSFSRETEFADPVEPLQPIGILDDVTPLSSIPLPYCQQGTSLLSDWPGQYLKK
VYRRTPPIDPEILRTMKMQGTIGYAPNPMSSRRNQVAYKLEKRGGGRSQTKLFSNDTRPG
KLGEEAPFIAIPKRYRKIDVKYSKMGMEDFDFDQYNKTSFSGLEATLPNSYCNAMLQVLY
YMSPVRSILLSHMCHKEFCLACELGYLFHMLDISQGFPCQSSNFLRAFRTVPEASALGLI
LSDQNPESKKKVNLIQLIQSWNRFILHQIHYEILETRKRKLLEQQQNELAQTPGRDYFVY
KEKDFPSILGDIHSRLVPKANGDSLAINDADDSRSKRIQDFPSILYDIHLHLTPKSVPAN
GHCSNMYDDFERNGRFTDEEDGKYMWISSSSEGDGHDESKTGKEEMQDEETEVGRLFGMK
QIHVHKCLKCGREITKESAVLLCNLIYPDINASRAEYSFCDVLLQSLCPEQTTPAWCDCC
DKYQPTLQSRQLKILPHILAMNCGLDNQQNKCFWQTQTDLLVQKILDQSTPQSTSGSAGK
PCRYGTSCSRSGCRFKHAGRTGENSATNAGHLYNLHSWLPINIQIDLLRKGGVRIKKLSP
ANTDEVDNDDNVPTKEDVTQSVTYDLAAIVCYIDDPHHHERRNLVALINVGPEYHGRSRG
SPVSQWYIFNDFSISPVPAQEVIWFSLDWKIPCVLYWVNRDMPKNVVPPIENPLTMDVFC
EDKCLARNNGARKMITFTPLAADEMPGQGDIVAMDAEFVTLNQEEAELRSDGKLSTIKPS
QRSVARITCIRGCGPLEGTPFIDDYISTQEQVVDYLTKFSGIKPGDLDANFSSKHLTTLK
STYQKLRFLVDNGVRFVGHGLKNDFRVINLVVPPEQVIDTVLLFHLPHHRMVSLRFLAWH
FLGLKIQSVTHDSIEDARTALQLYQRYQQMEMEGSVNATLKELYEVGKTLQWKVPGVDDT
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcctggtttgggtcactatgacccgtctgtaacagcttcgtcagaggaaatt
ttaatgtatgatgatggcagcgcacattattctgtagaagaagaatcgtatgaaatctca
aatgaaggttttgttgctacaactgaacacttcactgaaggatatacagaagccgaattc
caagaaacgcacaccatcctcgcagatggaggagaacggtttggagtatctgctgttgca
tttgatcaagaggaagaattgctatggatgggaaatcaaggcggccatgttacatcctac
tatggaccaggcttgcagaaatacacttcttttcaagtccacgcgaatcaggaagttcgt
catatccacacatttgaggatgggatcttggctttgacacagactgcacttcgttgtcaa
atgaggagaggcatcccaatatttacacacagttccgataatatgcaagaaatgcagtgt
cagcttcagatttcgcgagatacattgctaatgggaggacatcaagataaaataattgaa
ttcaatctcagtcagggccaggaaacaaatctgcttcatgtagggaagaatggatgtgcc
atccttcgacaacacccacgatttatttgtgctggtgatcctgctggtagaattgacctt
cgagatccaaacactttacaagtagaacatactttagaagcgcactcaggaagtctatca
gattttgatgttcatggaaatctgctggttacctgtggattctcaaataggcagggaaac
ttatcagtagatcgtttcctaatggtgtacgaccttcgcatgatgcgtgctgtcacacct
attcaagtgatgctggatcctcttctgttgagattcctgccttccttttcatctcgtcta
gtcactgtatccactcttggccaaatacagcttgttgacactgttgctctttcacagcca
aatctgtgcctgtatcagatgaatacagctggatccatgtgtctggcactggatgtatct
tcgtcttgccagtgcatggcatttggtgatggaggtggttccatccatttctacacgtcc
aatccacacacagcaatgttcaatagcttttcacgagagactgaattcgcagatcctgtc
gaacccctacagccaattggcatcctagatgatgtgacacctttgtcgtcaatacctcta
ccatactgtcaacaaggaacgtcattactttctgattggccggggcagtatttgaagaaa
gtttacagacggacgcctcctattgaccctgaaatactgagaactatgaaaatgcagggc
acaattggatatgcaccaaaccctatgagcagccgaagaaatcaagttgcatataagcta
gagaagcgtggtggaggtcgcagccagacaaaactttttagtaatgatacacgacctggt
aaattgggagaggaagcgcccttcattgcaataccaaaacgttatcgtaaaattgatgta
aaatattcaaagatgggaatggaagactttgattttgatcagtataataagacaagtttc
tccggccttgaagctactcttcctaattcttattgcaatgcaatgcttcaggtcctgtac
tacatgagcccagtacgtagtattctgctgtcacacatgtgccacaaagaattctgtttg
gcatgtgagcttggctacttgttccatatgcttgatatctcacaaggatttccttgccaa
tccagcaactttctgcgagctttccgcacggttcctgaagcatcagcccttggtcttatt
ctttctgaccagaatcctgaaagtaaaaagaaagttaatctaatacaacttattcagagc
tggaatcgcttcatccttcatcagattcattatgagatcttagaaacacggaaacgaaaa
ctattggaacagcaacaaaatgaattggctcaaacacctggtcgagactactttgtatat
aaagaaaaagattttcccagcatattgggtgatattcattctcgacttgtgcccaaagcc
aatggtgacagtttagccatcaatgatgcagatgacagtagaagtaagagaatacaagat
tttccgagcattctgtatgacattcatttacatcttactcccaaatcagttccagcaaac
ggccattgttccaatatgtatgacgattttgaaagaaatggaagatttactgatgaagaa
gatggtaaatatatgtggatatcgtcatcaagtgaaggtgatggacatgatgaaagtaaa
actggtaaagaagaaatgcaggatgaagaaacagaagtcggtcgtctttttggcatgaaa
caaatccatgttcacaaatgtctgaaatgcggccgtgaaattaccaaagagtctgcagtt
cttctgtgtaaccttatatatccagacattaatgcaagcagagcagagtatagtttctgt
gatgtacttctgcaaagtttgtgtccagagcaaaccacaccagcttggtgtgactgttgc
gacaaatatcagccaactttacagtcacgccagttgaaaattctaccacacatccttgcc
atgaactgcggtctggacaaccagcagaataaatgtttctggcagacacagacagacctg
ttggttcagaaaatattagaccagtctacccctcaaagcactagtggatcagctggtaaa
ccatgtcgttatggtaccagctgttctcgatcaggttgccggtttaagcacgctggtaga
acaggagaaaatagtgcaacaaatgcaggtcatctatataacttacattcttggcttcct
attaatattcaaatagatttgttacgaaagggaggagttcgtattaaaaagctatctcca
gccaatactgatgaagtagacaatgatgataatgtacctacgaaagaagatgtaacacaa
agtgtcacctatgatttggctgccattgtgtgttacatagatgatcctcatcatcatgaa
cggagaaatttggttgcactaataaatgtagggcctgaatatcatggcagatcgaggggt
tcgccagttagtcagtggtacatctttaatgacttcagtatttcaccagttcctgcacaa
gaagtgatttggtttagtctggattggaaaataccctgcgtcctatattgggtgaatcgt
gatatgccgaaaaatgttgtacctccaattgagaacccactcacaatggatgtgttttgt
gaagataagtgtctggcacgcaataatggagccagaaaaatgatcacattcacacctctc
gcagcagatgagatgccaggacaaggtgatatagtggccatggatgcagaatttgtgacc
ctgaatcaggaggaagccgaacttcgtagtgatggtaaactttcaaccatcaagccatca
caaaggtctgtggctcgtataacttgtattcgtggttgtggtccgttggaaggaacacca
ttcatagatgattacatctcaacccaggaacaagtagtagattatttaaccaagttctca
ggcattaaaccaggggacttggatgctaatttcagctctaaacatcttactactctgaag
tccacatatcagaagcttagatttcttgttgacaatggtgtcagatttgttggtcatgga
ctgaagaatgatttcagagtaatcaatttagtggtgcctccagagcaagtaatagacact
gtactactttttcacttgccacatcatcgcatggtgtctcttcgttttctggcatggcat
tttttgggattgaaaatccagtcggtgacccacgactccattgaagatgctcgaactgca
cttcagttataccaacgttatcagcaaatggaaatggaaggaagtgtaaatgcaacatta
aaagaactatacgaagttggtaagacattacaatggaaagtaccaggggttgatgatact
taa
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integrated database retrieval system
