Periplaneta americana (American cockroach): 138714606
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Entry
138714606 CDS
T10946
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pame Periplaneta americana (American cockroach)
Pathway
pame04382
Cornified envelope formation
pame04512
ECM-receptor interaction
pame04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pame00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138714606
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138714606
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
138714606
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pame04147
]
138714606
00536 Glycosaminoglycan binding proteins [BR:
pame00536
]
138714606
Exosome [BR:
pame04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
138714606
Glycosaminoglycan binding proteins [BR:
pame00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138714606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
138714606
NCBI-ProteinID:
XP_069702728
LinkDB
All DBs
Position
15:complement(7429406..7721010)
Genome browser
AA seq
1793 aa
AA seq
DB search
MRRLRRTAVPLTLVLLCLVRGGHSAACKGCVGAYKCDCTGIKGLPGEVGVFGLRGSEGYP
GDIGPEGPPGPKGEKGASGEDGGAGDKGYRGDPGAPGFRGAPGIPGLLGDEGLSGPHGLD
GCNGTDGSPGPRGYPGQHGGRGLPGGEGPPGIPGDPGDGGVNSKGVKGERGLSGRPGTVG
LPGYDGRPGLPGPAGPPGFPGPYGPPGLEGERGDPGDRKYGLPGMPGEQGEQGEPGPPGK
LVYDGEEAVEHPPVYNWKGPKGTKGTYGDLGLRGLKGEVGPKGPQGQSGISGAKGMKGEQ
GADGQRGKQGKEGPPGPSGAKGAKGAPGYAGKPGEDGLKGPSGTPGRPGPPGVQGIEGEP
GVYNPNLDEEGRNGVEGHQGPIGPPGDRGLAGIPGQPGSTGYIGPPGEPGTPGLPGPRGP
KGISTKGERGDDGLPGARGPQGPPGPPGPSGPFGEKGYPGLTMIGPAGEDGVPGRDGFNG
PTGDRGENGLQGPKGMVGIGVPIPGPQGEAGLPGPPGAPGVPGLPGLPGGKGQRGSKGDD
CGVCLPGLDGTKGEPGDPGRNGIPGNPGFPGLQGPRGIKGQRGKTGVPGRPGLDGRNGTS
GLAGAPGPKGQPGELIYPPESQLKPDKGAKGDRGIPGLQGPPGPVGLPGNEGPEGWKGEK
GQHGPDGIPGKNGRPGLDGYPGQKGEDAWATKESLRGDPGWDGERGEWGEPGSDGAKGES
GDAGHFIMEIKGIKGFKGPVGDRGQDGQKGIAGATGGQGLPGLPGPPGLIGLSITGSPGL
KGYSGMPGDQGLRGPPGAPGMDGLPGPPGPTSQKGSRGDPGLSILNGDMGSKGAKGQKGE
PGSEGPQGLSGRDGPHGELGSIGPKGAPGLAGLNGLPGAKGLPGDSLSGAPGAPGLPGLP
GLIGIFGTPGNRGEDGPNGVPGLKGLKGDFGQIGRRGIDGEQGQPGFPGNTGRMGIPGLP
GPIGDQGQAGAPGVEGPPGRPGFPGPAGAKGVRGDIGLSGGAGFRGRPGLQGLRGDQGLP
GLEGIPGESSFSGPKGEQGDGGLRGEPGIDGLPGLNGLRGVPGEPGRVINGVRGELGQKG
EPGLIGGRGLPGLEGMHGDVGVGGSKGISGDRGPPGYNGFKGREGTPGSKGLPGNPGLSG
PPGPTGERGNEGEPGKFGRPGLPGDAGPMGDRGVPGPAGPKGLPGEPGYSQFASATKGEP
GVPGLYGLKGLRGMQGVPGVSGLPGRVGPTGEIGSPGQAGFPGISGSPGYPGDTGPAGPP
GFPGLGAEAGEKGRAGLNGIPGKPGRAGQKGAPGEYGRDGPRGIAGRPGGVIVGVKGFPG
SPGLPGSPGSPGLRGLPGLDGQPGIEGLKGMRGAAGQAARSFKGMAGSVGPPGLPGFTGQ
KGLQGEPGSPGLPGFPGRIGDRGLPGESGAPGLSGLPGRKGPRGDRGETPVTSLSARGIP
GDRGPAGAPGFNGAQGQMGKPGLDGLPGVLGEDGVAGRAGLPGLPGPKGQVGFPGRPGPR
GNKGMAGFPGSRGDPAPPGPTPKSRGFFFTRHSQTDQTPACPRNTVRMWSGFSLLHFLGN
AKAHGQDLGAPGSCLQRFSTMPFMFCNLNNVCDYSSRNDYSYWLSTDYPMPAMMTPIGAR
DLRQYISRCTVCEAPTRVITVHSQSTQTPTCPDDWEPLWKGFSFLMHTDAGAEGSGQSLV
SPGSCLEYFRSTPFIECHGIGRCNYFTTAYSYWLATIEERDMFRRPRQQTLKAGSLETRI
SRCMVCIRRRRAGGDGGPLDIPDTAEYSRLPPSPPQRGPGGYSYNSRFPHRSG
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggctgcggcggactgcggtgcccctgacgctggtgctcctgtgcctcgtccgc
ggcggacactcggcggcttgcaaaggatgtgtgggcgcgtacaaatgcgactgcaccggc
ataaagggcctccctggagaggttggcgtgttcggcctcaggggcagtgagggctatccc
ggagacatcgggcccgagggaccgccgggccccaaaggggagaagggagcaagtggcgaa
gatggcggagccggcgataagggctaccggggtgatcccggtgccccaggattccgagga
gcccccggtattccggggctcctgggcgacgaaggtctgtccggcccccacggcctggac
ggatgcaacggcaccgacggcagcccgggcccgcgagggtaccccggccagcacggcggc
agaggtcttcctggaggagagggtccccccggaatccctggcgacccgggcgatggcggc
gtcaacagcaaaggggtgaagggagagcgtgggttgtccggaaggcccggcacagtggga
cttcctggttacgacggccgcccaggacttcctggaccagcaggtccgcccggatttccg
ggtccctatggaccgccgggcttggagggagagcgcggagacccaggagatcgcaagtac
ggacttccgggcatgccgggtgaacagggggagcagggcgaacccgggccccctgggaaa
ctggtctacgacggcgaagaggcagtagagcatccgcccgtctacaactggaaagggcct
aaaggcacgaagggcacctacggggatttgggtcttcgtggactcaagggcgaggtgggt
cctaaaggtcctcaggggcaatccggaatttccggggcaaagggcatgaaaggggagcag
ggcgcggacggacagcgcggcaaacagggcaaagagggtcctccgggccccagcggagcg
aagggagccaagggagctccgggctacgccggcaagcccggcgaggatggattgaaagga
ccctcgggcacaccgggcaggcctgggcctcccggagtgcagggcattgaaggagagccc
ggcgtgtacaaccccaacctggatgaggagggtaggaacggcgtcgagggccaccaggga
cctataggtcctcccggcgacagaggtctggccggaatccctggacagcccggcagcact
ggctacatcggacctccaggagagccggggacgcctggactgccaggaccgcgcgggccc
aaaggcatcagcaccaagggcgagcggggcgacgatggtctgccgggcgccagaggtcct
cagggaccgccgggtccgcctggtccatcaggaccgtttggggaaaagggatacccaggg
ctgacaatgatagggcccgccggagaggacggcgtgccaggaagagatggcttcaacggc
ccgaccggcgatcgtggagaaaacggcttgcaaggtcccaaggggatggtgggaatcggt
gtcccgattccaggcccgcaaggagaggctggacttccggggcctcctggagctcctggg
gtacctggtctgccggggctacctggaggaaagggacaacgcggatccaagggcgacgac
tgcggggtgtgcctgccaggtctggatggaacaaagggggaacctggagaccctggcagg
aacggcattccaggaaatcctggcttcccgggactccaaggtcctagaggaatcaaagga
cagagagggaaaactggtgtacctggccgcccaggcttggatggcagaaatggaacttca
ggtctggctggagcgcccggaccgaaagggcagccaggcgaattgatataccctccagaa
agccaattgaagccagataaaggtgctaaaggtgacagaggaattcctggactccaagga
cctcctggccctgtaggtttgccgggcaatgaaggaccagaaggttggaaaggagagaag
ggtcaacatggtcctgatggcattcctggcaagaacggaagacccggccttgatggatat
cctggtcagaagggcgaggatgcttgggcgacaaaggagtccttgcggggagatccagga
tgggatggtgaaaggggtgagtggggcgagccaggcagtgacggtgcgaagggagaatca
ggagatgccggacacttcataatggagatcaaaggaattaagggcttcaaaggacctgtt
ggagatcgaggacaggacggtcagaagggaattgcaggtgccactggtgggcagggccta
ccaggtcttccagggccgccaggattgatcgggctctccatcacaggctcccctggactg
aaaggatactcgggaatgcctggagatcaaggtctgcgaggacctcctggagctcctggc
atggatggcctgcccggaccacctgggcccactagtcagaagggaagtcgcggtgatccg
ggactcagcatcttaaatggtgacatgggtagcaagggcgctaaaggacagaagggagag
cctggaagtgaaggccctcaaggactatctggaagagatggacctcatggagaactaggc
agcatcggaccaaaaggagcgcctggactggctggactcaatggcctacctggtgcgaaa
gggctgccaggagactcgttgtcaggggcaccaggagcacctggcttgcctggacttccg
ggactcattggaatatttggaactcctggaaacagaggagaggacgggcccaatggcgtg
cctggtctgaaggggctcaagggagacttcgggcagattggcaggaggggaatagatgga
gaacaaggtcagcctggattccctgggaatactggccgcatggggattccagggttacca
ggtcccattggtgatcagggacaagctggtgctccaggtgttgaaggtcctccaggaaga
cctggatttcctggacctgctggagccaaaggtgtgagaggtgacatcggactttcagga
ggtgcaggcttcagaggacgaccagggctacagggtctgcgaggtgatcaaggtcttcca
ggacttgagggaatccctggagaatcgtctttcagcggtcctaagggagagcagggagat
ggagggctgcgaggtgagccaggcatcgatggcctgcctggactgaatgggctgcgtgga
gtgcctggagagccagggcgtgtgataaacggggtgcgaggagaacttggccagaaagga
gagccgggactgataggaggccgagggctgccagggctggagggcatgcatggtgacgtg
ggtgtaggtggatcaaagggaatcagtggtgatcgaggaccaccaggatacaacggattt
aaaggcagagaaggaactcctggctcgaagggactacctggaaacccaggtctgagtgga
ccacccgggcccacaggagaaagaggcaatgagggagaacctggaaaatttggcaggcca
ggtctgccaggagatgcaggcccaatgggagacagaggtgtgcctggacccgcaggaccc
aaaggtttgcctggagagcccggctattcacagtttgcttcagccacgaaaggagagcca
ggggtgccaggcctgtatggactgaagggcttgcgtggcatgcagggtgtgcctggcgtg
tctggactgcctgggagagtgggacctactggagagattggatcaccaggacaggcaggt
ttcccaggaatcagtggcagcccaggatatccaggggacactggccctgccggacctcca
ggattcccaggcttgggtgcagaggctggtgagaagggaagggccggacttaatggtatc
ccagggaaaccaggaagagcaggccagaagggtgcccctggcgaatatggacgtgatgga
ccacgcggcattgcaggaaggcctggtggtgttattgttggtgtgaaaggattcccaggt
tctccaggtctgcctggatcgcctggaagtccagggctccgagggctgccaggtttggat
ggacagcctggaatcgaagggctaaagggaatgcgtggagcagctggtcaggcagcaagg
agtttcaagggaatggcaggctcggttggtcctcctggattgcctggcttcacagggcag
aaaggccttcaaggtgaacctggctcaccagggttgccaggcttcccaggcaggataggt
gacagaggcctgcctggcgagagtggggccccagggctgtctggcctgcctgggcgcaag
ggaccaagaggagatcggggtgagactccggtcaccagcctgagtgcacggggtatccca
ggagacagaggacctgcaggtgctccaggtttcaatggtgctcagggacaaatgggaaaa
ccaggacttgatgggttaccaggtgtgctgggagaagatggggtagctggacgagcaggt
ctgccaggacttcctgggcccaaaggtcaagtgggcttcccaggaagaccaggacctaga
ggaaacaagggcatggcaggttttcctggctccagaggagaccctgcaccccccggccct
actcccaaaagcaggggcttcttcttcacacgacactcgcagacagaccaaacaccggcc
tgcccaaggaacacagtgcgcatgtggagcggcttctctctgctgcacttcctaggcaac
gccaaggcccacgggcaggacctgggggctcctggtagctgtctgcagaggttctccacc
atgccattcatgttctgcaaccttaacaacgtctgcgactactcgagccgtaatgactac
agctactggttgagcactgactatcccatgcccgccatgatgactccgatcggggcgagg
gacctcagacagtacatatcgaggtgcacggtgtgcgaggcccccacgcgagtcatcacg
gtgcacagccagtccacacagacaccaacatgccccgacgactgggagccgctttggaag
ggattcagcttcctcatgcacacagatgcaggagccgaaggcagtggacagtcactggtg
tcccccggatcgtgtctcgagtacttcaggtccactcccttcattgagtgccacggaatc
ggacgctgcaactacttcaccactgcgtactcatactggctggcaacaattgaagaacgc
gacatgttccgacgcccccggcagcaaacactcaaggcaggcagcctggagacacgcatc
agccggtgcatggtgtgcatccggcgcagacgtgcaggcggcgatggcggtcccctggac
atcccggacacggccgaatattcccgactgccacccagtcctccccagcgagggcctgga
ggatactcgtacaactctcgcttccctcatcgtagtggttaa
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integrated database retrieval system
