KEGG   Pseudomonas amygdali: BKM19_000030
Entry
BKM19_000030      CDS       T05354                                 
Name
(GenBank) restriction endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pamg  Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pamg02048]
    BKM19_000030
Enzymes [BR:pamg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BKM19_000030
Prokaryotic defense system [BR:pamg02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BKM19_000030
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N HSDR_N_2 Helicase_C Mt_ATP_synt AAA_11 AAA_19 AAA_34 SLFN-g3_helicase SNF2-rel_dom PhoH DUF87
Other DBs
NCBI-ProteinID: AVB12213
LinkDB
Position
p1_tig4:complement(6089..8452)
AA seq 787 aa
MDKKSLSERDICSKYIAPAIEQAGWDMHKQVLEEFGFTKGRIIVRGKLHSRGEHKRADYV
LSYQRNLPIAVIEAKDNKHSVGSGMQQALGYAEALDVPFVFSSNGDGFLFHDRSGTGAQV
ETELRLDQFPGPDELWQRYCQWKGLDNAAQHKVAAPYYDDGSSRMPRYYQMNAINRTVEA
VARGQDRVLLVMATGTGKTYTAFQIIWRLWKSKQKKRILFLADRNILVDQTKNNDFKPFG
KAMTKITKRMVDPSYEIYLSLYQAVTGTEEEMNIYKEFSRDFFDLIVIDECHRGSAAEDS
AWREILDYFSSATHVGLTATPKETKEVSSITYFGEPVYSYTLKQGIEDGFLAPYKVVRID
FDKDLQGWRPPKGMLDKNGELIEDRIYNLKDMDRTLVIEARTQLVAQEVTEFLKATDPFQ
KTIVFCDDINHAERMRQALVNLNPERVAENRKYVMRITGDDQEGKAELDNFINPEERYPV
IATTSKLMTTGVDAQTCKLIVLDQHIKSMTEFKQIIGRGTRINEDFGKYWFTIMDFKKAT
ELFADPAFDGDPVVVYAPEGSEPPVPPDDLLEGDSISAGSDAEGDDLDFTGEEDGRKRVK
YVIDSIPIYVIAERVQYYGPDGRLITESLHDFTRACVQKQFASLDDFLRRWSDAEQKKAI
IDEMAAQGVMWEALAEEVEKKQGKPLDPFDLICHVAFDQPALSRKERAEQVKKRNYFAKY
SGAARQVLEALLDKYADTGVEHIEDIKILQLDPFCQIGAPIELVKAFGGKAGYNKAIHEL
EDELYAS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atggacaaaaagtcgctttccgagcgggacatctgcagcaagtacatcgccccagccatt
gagcaagccggctgggacatgcacaagcaagtgctcgaagaatttggctttaccaagggc
cgcatcatcgtacgcggcaagctgcacagccgtggagagcacaagcgcgccgactacgtc
ctcagctaccagaggaacctgcccatcgccgtgatcgaggcgaaggataacaagcattct
gttggctcaggtatgcagcaagcattgggttatgcggaggcgctggatgtgccgttcgtg
ttctccagcaatggcgatggctttctgttccatgaccgcagtggcaccggcgcgcaggtc
gaaaccgaactgcgcctcgaccaattccccggcccggatgaactctggcagcgctactgc
caatggaaaggtctggataacgcagcccagcacaaggtcgccgcgccctactacgatgac
ggctccagccgcatgccgcgctactaccagatgaacgccatcaaccgcacggtcgaggcc
gtggcgcgtgggcaagatcgtgtgctgctggtcatggccaccggcaccggcaagacctac
accgcgttccagatcatatggcggctgtggaagtccaagcagaagaaacgcatcctcttc
ctggccgaccgcaacatcctcgttgatcagaccaagaacaacgatttcaagccgttcggc
aaggcgatgaccaagatcaccaagcgtatggtcgatccttcctatgagatctacctgtcg
ctctatcaggccgtcaccggcaccgaagaagagatgaacatctacaaagagttctctcgc
gacttcttcgacctgatcgtcatcgacgaatgccaccggggcagcgccgccgaggattct
gcctggcgtgagattctcgactacttctccagcgccactcatgtcggcctcaccgccaca
ccgaaggaaaccaaagaggtgtccagcatcacctacttcggtgagccggtgtacagctac
accttgaagcaaggcatcgaagacggttttctcgcgccctacaaagtggtgcgcatcgac
ttcgacaaagacctgcaaggctggcggccgcccaagggcatgctcgacaagaatggcgag
ctgattgaagaccgcatctacaacctcaaggacatggatcgcaccctggtcatcgaggcg
cgtacccagttggtcgcgcaggaggtgactgagttcctcaaggccactgacccattccag
aaaaccatcgtcttctgtgacgacatcaaccacgccgaacgtatgcgacaggccctggtc
aacctcaaccccgaacgcgtggctgagaaccgcaagtacgtcatgcgtatcaccggcgat
gaccaggaaggcaaagccgagctggataacttcattaacccggaagagcgctacccggtg
attgccaccaccagcaagctgatgaccaccggcgtcgatgcgcaaacctgcaagctgatc
gtgctcgaccagcacatcaagtcgatgaccgagttcaagcagatcatcggccgtggcacc
cgtatcaacgaagacttcggcaagtactggttcaccattatggacttcaaaaaggccacc
gagctgtttgccgacccggccttcgacggcgacccagtagtagtctacgcccccgaaggc
agcgagccgcccgtgccgcctgacgacttacttgaaggcgacagcattagcgcaggcagc
gatgccgaaggtgatgacctggactttaccggcgaggaagacggcaggaagcgcgtcaaa
tacgtcatcgacagcatccccatttatgtgatcgccgagcgcgtgcagtactacggcccg
gacggacggctgatcaccgaatcactgcacgacttcacccgcgcctgcgtgcaaaaacag
ttcgcctcgctggatgacttcctgcgccgctggagtgatgccgagcagaagaaggccatc
atcgacgagatggccgcccaaggcgtgatgtgggaagccctggccgaagaggtggaaaag
aaacaaggcaagcccctcgatccgttcgatttgatctgccacgtcgccttcgaccaacca
gcgctgtcgcgtaaagagcgtgccgagcaggtgaaaaagcgtaactacttcgccaagtat
tccggcgcagcacgccaggtgctggaggcgctgctggataaatatgccgataccggcgtt
gaacatatcgaggacatcaaaatcctccagctcgaccccttctgccagatcggtgccccc
atcgaactggtcaaagcctttggcggcaaggccggctacaacaaagccatccatgaactg
gaagatgagctttacgccagctag

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