Pseudomonas amygdali: BKM19_001595
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Entry
BKM19_001595 CDS
T05354
Name
(GenBank) sugar-binding protein
Organism
pamg
Pseudomonas amygdali
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RHS
Flavi_E_stem
Motif
Other DBs
NCBI-ProteinID:
AVB17295
LinkDB
All DBs
Position
complement(193375..196167)
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AA seq
930 aa
AA seq
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MTVSFLRKVVVGIACTWLAFSAHASTISRTYTALGQVASIDGARTDVNDVTRYAYDAQGN
LTTVTNALGQVYALASFDSYGNPQSITDPNGVVTTLSYTPQGWLASLTIDSSTTQYAYNE
VGDLLQVTTADGNWVKYSYDDARRLIGVRNRLGESINYTLDPMGNRTAERTKDVNGTVVH
LQRRVFDELGRLIRVVGAGDQTQRYGYDLNDNQSSDTTPRNHKTQQAFDALNRVSKIVDP
LQGVTALGYNSDDKVTKVVDPRGVTTLYTYDSLGNRISSKSPDGGTSTYAYDEANNLIRS
TDARGVVTEYAYDALNRLTSKSYPATPALNIKFLYDQTADGNLGIGHLTGLQDSAGVLTY
TYDAKGNLVRQYRSVGVNSGDYYETLNYGYDAARNLVQIGYPSSINLTYTRNSAAQVTGV
KLAIGNKTATLASNISYQPFGPVNSLTWGNGILLSRTYDQDYQLTQQQVGNWQTTYRYDA
DSNIAETATSLWGAVQYEYDALGRLTQEQTNSLKKAYSFDATGNRTQRTTTSLTTSDATG
TQSLTYASDSNRLTSVNGSTLPMDAAGNHTQINGRRFTYDSQGRLSEVYQANIYKIADYK
YNALGQRIIKRSYVMGSQALAGTTTYLYDPSGKLIGQTFYDGNGQKTSGQYWFWLDNMPL
AQLTANFSALGEVSSSKLIYLHVDHLNTPRLATDSSQALLWRWNSDAYGVGAPEEDVDGD
GKATAIALRFPGQIYDAQTQLSYNYHRDYNPDTGRYVQSDPIGLGGGRNTYAYVNANPMS
YIDPMGLAAIALPTWFDSIPDILPQVGRGVGLGLGVGASCLLYSPSLGNGECPAGGCYHN
ESVDSPVPDAIPGDKTRGPTDIWIKPEGDMDTANNDFDDMNPSDVKDIANGRAGTLPDGR
KIVVRPDSSDGRPTLEIQSGRDRVKVRYGR
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtttctttcttgcgcaaggtagtggtagggattgcctgcacctggctggcattc
tccgctcacgcaagcaccatcagccgcacgtataccgccctcgggcaggttgcaagtatc
gacggcgcacgcactgacgtaaatgacgtcactcggtacgcatacgatgctcaaggcaac
cttactactgtgaccaacgcgctgggtcaggtctatgcgcttgccagttttgacagttac
ggcaatccgcaaagcatcaccgacccaaacggagtggtgacaacgctcagctacactccg
caaggctggcttgccagcctgacgatagactcgtcgacgactcagtatgcctacaacgaa
gttggcgatctgctgcaagtcaccacggctgatggcaactgggtcaagtacagctatgac
gatgcccgtcggcttatcggcgtgcgtaatcggcttggcgaaagtatcaattacaccctc
gacccaatgggcaaccgcacggcagagcggaccaaagacgtcaatggaaccgtggtccat
cttcagcgacgggtatttgatgagttaggtcgtctgatccgggtagtgggtgctggtgat
cagacgcagcgttatggctatgacctgaacgacaaccaatcaagtgacaccaccccacgc
aatcacaaaacgcagcaagcgttcgacgctctgaatcgggtcagcaagatcgtcgatcct
ttgcagggcgtgactgccttgggttacaactcggatgacaaggtcaccaaagtggttgac
ccgcgtggtgtgacgacgctgtatacctacgacagcttaggcaaccgcatcagcagcaaa
agccccgatggtgggaccagcacttacgcctacgacgaggccaacaatctcattcgcagc
actgatgcacgtggggttgtgaccgagtacgcctacgacgcgctcaatcgcctgaccagc
aaaagctatcccgccacacctgcgctcaatatcaagtttctctacgaccagaccgctgat
ggcaatctcgggattggccacctgacagggctacaggacagcgctggtgttctgacgtat
acctatgacgccaaaggtaacctggtcaggcaatatcgttcggtaggtgtcaacagcggt
gactattatgaaacgctgaattacggttatgacgctgcccgtaatctggtgcaaatcggc
tatccatcaagtattaacctgacctacacccgcaatagcgcggcacaggtaacaggcgtc
aagctggcaattggcaacaagacggcgacactggcaagcaacatttcctaccagccattc
ggcccagtcaattcgctgacctggggcaacggtatcctgctgtcgagaacctatgaccag
gattatcaactgacccagcagcaggtcggtaactggcagacgacttatcgttacgacgct
gacagcaacatcgccgagacagccactagcctgtggggtgcggtgcagtatgaatatgac
gcgctgggacgtttgactcaggagcagaccaatagcctcaaaaaggcttacagcttcgac
gctacaggtaacaggacgcaacgtactaccaccagccttaccacaagcgatgccactggc
acccagtcgttaacctatgccagcgacagcaaccggctgaccagcgtcaatggctcgaca
ctacctatggacgctgcgggtaaccacacgcagatcaatggccgccgattcacctacgac
agccaaggccgtctgagcgaggtttatcaggcaaacatctacaaaattgccgactacaaa
tacaacgcactaggccagcgaatcatcaaacgctcttacgtcatgggtagtcaggcgttg
gcgggcacaaccacctacctgtatgacccaagcggcaagctgatcggccaaacgttctat
gacggaaatggccagaaaaccagtggccaatactggttctggctggacaacatgccgctg
gcacagctgacggcgaacttctctgcgctgggtgaagtgagcagcagcaaactgatttac
cttcatgtcgatcacctgaacacaccgagactggcgacagacagttcccaggcactgctg
tggcgttggaacagcgatgcctatggtgtaggcgcgcctgaagaggatgtggatggcgac
ggcaaagccacggccatagcactaaggtttccaggacagatctacgatgcgcaaacgcag
ctgagctataactatcatcgggattacaacccggacaccgggcggtatgtgcagagtgat
ccgattgggctagggggtggacgtaacacttacgcgtacgttaacgccaaccctatgtcg
tatattgaccctatgggattagcagcaattgcattgccaacttggtttgatagcattcca
gatattctaccccaagttgggagaggtgtcggcttaggcttaggtgtcggtgcgtcatgc
ttactttactcaccttccctgggtaatggagagtgtcctgcgggagggtgttaccataat
gaaagtgttgatagtccagtacctgatgcgattccaggtgacaaaactagaggacctact
gatatatggatcaagcctgaaggagacatggacacagcaaataacgacttcgatgatatg
aatccctctgacgttaaagatatagcaaacggtagagcaggaacattgccagacggtcga
aaaattgttgtgcgccctgatagttcagacggccgacctacattggagattcagagcgga
cgtgaccgagtaaaggtgagatatgggcgataa
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