Pseudomonas amygdali: BKM19_002800
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Entry
BKM19_002800 CDS
T05354
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
BKM19_002800
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AVB12650
UniProt:
A0AB35R136
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Position
complement(426933..429254)
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AA seq
773 aa
AA seq
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MDSINSRIAEELGVRPQQVAAAVALLDEGSTVPFISRYRKEVTGSLDDTQLRHLEERLRY
LRELDDRRVSILASIEEQGKLTPELARDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPSLTPDAEAARFVDAEKGVADVKAALEGAKYILMERFAEDASLLDKLRS
FLKQEAVISARVVPGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGFLSSALKVG
EELPGAMHPCELMIGERFGIQNQSRPADKWLAEVVRWTWKVKLYSHLETDLLGELRDGAE
TEAINVFAHNLHDLLLAAPAGQRATLGLDPGLRTGCKVAVVDATGKLLDYATVYPHVPKN
QWDQTIAVLAALCAKHSVDLIAIGNGTASRETDKLAADLIKKYPGLKMTKVMVSEAGASV
YSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNTTLAQNIVAHRDENGAFKTRAALKKVSRL
GEKTFEQAAGFLRVMTGDNPLDSSAVHPEAYPLVQRIAAETDRDIRSLIGDASFLKRLDP
KKFTDETFGLPTVTDILQELEKPGRDPRPEFKTAEFQDGVEELKDLQPGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKVDGARGARPGSSPRQQNSAPRKETTAPAPINNAMASLFANAKQLKKR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcatcgccgaagaactcggcgtacgcccacaacaggtcgca
gcggccgtagcactactggatgaaggctcgaccgtgccattcatttcccgctaccgcaag
gaagtgaccggcagtcttgatgacacgcaactgcgccatctggaagaacgcctgcgctat
ctgcgtgagctggatgaccggcgtgtcagcattcttgccagcattgaagagcaaggcaag
ctgaccccggagctggcgcgcgacatcaagctggccgacaccaagacccgtcttgaagat
ttgtacctgccttataagcagaaacgtcgcaccaagggccagatcgctcttgaagccggc
ctgggcgaactggccgacggcctgttcaatgacccgagcctgaccccggacgccgaagca
gcccgttttgtcgacgccgagaaaggcgtggccgatgtcaaagctgcgctggaaggcgcc
aagtacatcctgatggagcgcttcgccgaagacgcatcgttgctcgacaagctgcgcagc
ttcctcaagcaggaagcggtaatcagcgcacgcgtggtgccgggcaaggaagaggaaggt
gccaagttccgcgattacttcgaacatgacgagccgctcaagagcatgccttcgcaccgt
gctctggcgattttccgcggccgcaacgaaggttttctcagctccgcactgaaagtcggt
gaagaactaccgggtgccatgcacccttgcgagctgatgatcggtgaacgcttcggcatc
cagaaccaaagccgccctgcagacaaatggctggccgaagtagtgcgctggacctggaag
gtcaagttgtacagccacttggaaaccgacctgctgggcgagctgcgcgacggcgcggaa
accgaagccatcaacgttttcgcccacaacctgcacgacctgctgctcgccgccccggct
ggccagcgcgccacactgggcctggaccctggcctgcgcaccggctgcaaggtcgctgtg
gtggacgcaaccggcaagctgctcgactacgcgaccgtttacccgcatgtgccgaagaac
cagtgggatcagaccattgctgtgctggctgccctgtgcgccaagcactcggtcgacctg
atcgctatcggcaacggcacggccagccgtgaaaccgacaagctcgccgccgacctgatc
aaaaaatacccaggtctgaaaatgaccaaggtcatggtttccgaagcaggcgcatcggtt
tattccgcgtcggaactggccgccaaggaattcccggacctcgacgtatcgatccgtggc
gcggtctccatcgcccgtcgcttgcaggatccgctcgccgagctggtgaaaatcgatccg
aagtccattggtgtcggtcagtatcagcatgacgtttcgcagctcaaactggcgcgcggt
ctggacgcggtggttgaagactgcgtgaacgctgttggcgtggacgtgaacaccgcttcg
gtggcgttgctggcgcggatttccggccttaacaccacactggcgcagaacatcgttgcg
catcgcgatgaaaacggcgcgttcaagacgcgtgcagcgctgaagaaagtcagccgtctg
ggcgaaaagacctttgaacaggccgcaggcttcctgcgcgtgatgaccggtgacaacccg
ctggactcttctgccgttcacccggaagcctatccactggtgcagcgtattgcggcagaa
accgaccgcgatattcgctcgttgattggcgatgcgagctttctcaaacgcctggacccg
aagaaattcaccgacgagacctttggtctgccaactgtgaccgacattctgcaggaactc
gaaaaaccgggtcgcgacccgcgtccggagttcaagacggcagagtttcaggacggtgtc
gaagaactcaaggacctgcaaccgggcatgattctcgaaggcgtggtcaccaacgtcacc
aatttcggtgcgttcgtcgatatcggcgtgcatcaggacggtctggtgcacatctcggca
ttgtccgagaagttcatcaaggacccgcgtgaggcggtcaaggccggtgatgtggtgaaa
gtgaaggtcatggaagtcgacattccgcgcaaacgcgtcggcctgtcgatgcgcatgagc
gacacgcccggcgagaaggtcgacggcgcacgcggtgcacgcccaggctcctcgcctcgc
cagcagaacagcgctccacgcaaggaaaccacggcacccgcgcccatcaacaacgcaatg
gcttcgctgtttgccaatgccaagcagttgaagaagcgctga
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