Pseudomonas amygdali: BKM19_003560
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Entry
BKM19_003560 CDS
T05354
Name
(GenBank) penicillin-binding protein 1A
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00550
Peptidoglycan biosynthesis
pamg01100
Metabolic pathways
pamg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BKM19_003560
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BKM19_003560
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pamg01003
]
BKM19_003560
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pamg01011
]
BKM19_003560
Enzymes [BR:
pamg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
BKM19_003560
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BKM19_003560
Glycosyltransferases [BR:
pamg01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
BKM19_003560
Peptidoglycan biosynthesis and degradation proteins [BR:
pamg01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
BKM19_003560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
CyanoTRADDas_TM
Motif
Other DBs
NCBI-ProteinID:
AVB12788
UniProt:
A0AB35R1C0
LinkDB
All DBs
Position
complement(586488..588932)
Genome browser
AA seq
814 aa
AA seq
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MIRLLKFFWWSLVAVFCSLLLGLSGAFLYLSPTLPSVEALRSIQLQIPLRVFSSDGKLIA
EFGEMRRTPIRFAEIPPNFINALLSAEDDNFANHYGVDPSSLMRAATQLVKSGHIQSGGS
TITMQVAKNFFLTSERSFSRKTTEILLALQIERQLTKDEILELYVNKIYLGNRAYGIEAA
AQVYYGKSIRDVSLAQMAMIAGLPKAPSRFNPLANPTRAKERRDWILGRMYRLGKIDQTA
YQAALNEPLNASYHVPTPEVNAPYIAEMARAEMVGRYGSEAYTEGFRVTTTVPSDLQEHA
NKSIQQGLIDYDQRHGYRGPESRFPGMTRANWVQELTKQRMINGLEPGIVTQVDKTGLRV
LTRNGEKEETVDWATMKWARPYLNTNSLGANPKQPGDVAKVGDLVRLLRQDDGSLKFSQI
PVAQSALVSLDPQNGAIRALVGGFAFEQSNYNRAMQAKRQPGSSFKPFIYSAALDNGYTA
SSLVNDAPIVFVDEYLDKVWRPKNDTNTFLGPIRLREALYKSRNLVSIRLLQALGIDSTI
DYITRFGFSKQDLPRNLSLALGTATLTPMEIATGWATFANGGYKVSPYLIQTIENRDGQT
LFVANPPSVPANDVNTAPNTSTFAVHDSPSVIAGPPGTPAQPQTPAVAERVVDGRTTYIL
NSMLQDVIKRGTGRRALSMNRPDIAGKTGTTNDSKDAWFSGYNADYVTTVWSGFDQPESL
GRHEFGGTVSLPIWMDYMSAALKDKPPHQQAEPPGILSLRVDPLSGRAATPSTPNAFFEL
FKSEDTPPSVNELGGSSAPGSPLPADESAPIDLF
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
ttgatacgcctgctgaagtttttctggtggtccctcgtcgcggtattctgctcgctgttg
cttggcctgagtggcgcgtttctctacctgagcccgaccctgccatcggttgaagcgctg
cgaagcattcaactgcaaatccccctgcgcgtattcagcagcgacggcaagctgattgcc
gagtttggcgaaatgcgccgcacgccgattcgcttcgcggaaattccgcccaacttcatc
aacgccctgctatcggccgaagacgacaacttcgccaaccactatggcgtcgacccgagc
agcctgatgcgcgctgccacacaactggtaaaaagcggccatattcagtcaggcggcagt
accatcaccatgcaggtcgcgaaaaacttcttcctgaccagcgaaagaagcttttcacgc
aaaaccaccgagattctgttggccttgcaaatcgagcgccaacttaccaaagacgagatt
ctcgagctgtacgtcaacaagatttatctgggtaaccgcgcctacggaatcgaagccgcg
gcgcaagtctactatggcaaatcgattcgcgatgtaagccttgcgcaaatggccatgatt
gccggtctgcccaaggcgccgtcacgcttcaacccgctggccaacccgacccgcgccaag
gaacgccgcgactggatcctcggccgcatgtatcgcctgggcaagattgaccagactgct
taccaggccgctttgaatgagccgctcaacgccagctatcacgtgccgacgccggaagtg
aatgcaccgtacatcgctgaaatggcgcgggctgaaatggtcggccgttacggcagcgag
gcctatacagagggcttccgcgtcactaccacggtgccgagcgaccttcaggaacacgcc
aacaagtccatccagcagggcctgatcgattacgaccagcgccacggctatcgcggcccg
gaaagccgcttcccaggcatgacccgcgccaactgggtacaggaactgaccaaacaacgc
atgatcaacggcctcgagcccggcatcgtgacccaggtcgacaagaccggcttgcgcgtg
ctgacccgcaacggcgagaaggaagaaaccgtcgattgggccaccatgaagtgggcgcgg
ccttatctgaataccaacagcctgggcgcgaatccgaagcagccaggcgatgttgcgaag
gtgggcgatcttgttcggctgttgcgccaggacgacggctcgctgaaattcagtcaaatt
cccgtcgcgcagagcgccctggtctcgcttgacccgcaaaacggcgccattcgtgcgctg
gtcggcggcttcgctttcgagcagagcaactacaaccgcgccatgcaggccaagcgtcag
ccgggctccagcttcaaaccgttcatctacagcgctgcactggataacggctacaccgcc
tccagtctggtgaacgacgcacctatcgtgtttgtcgacgagtatctggacaaggtatgg
cgtccgaaaaatgacaccaacaccttccttggcccgatccgcctgcgcgaggcgctgtac
aagtctcgcaacctggtatcgatccgcctgctccaggccctcggtatcgacagcaccatc
gactacatcacccgctttggcttctccaagcaagacttgccgcgcaacctgtcgctggca
ctgggcacggctacattgaccccgatggaaatcgccaccggctgggccacctttgccaat
ggcggttacaaggtcagtccttatctgatccagaccatcgagaaccgtgacgggcagacc
ctgtttgtggccaatccgccaagcgttccggccaacgacgtcaatactgcgcccaacacg
tcgacctttgccgtgcatgacagcccgagcgtgatcgcaggcccaccagggacaccggcc
cagccgcaaacgcccgccgttgcagagcgcgttgtggatggccgcacgacctacattctg
aacagcatgctgcaggacgtaatcaagcgcggcaccgggcggcgcgctctgtcgatgaac
aggccggatatcgccggcaagaccggtacgaccaacgattccaaggatgcgtggttctcc
ggttacaacgcggactatgtgacaactgtctggagcggcttcgatcagcctgaaagcctt
ggtcgtcatgaatttggcggtacggtctccctgccgatctggatggactacatgagcgct
gcactcaaggacaagccaccgcatcagcaggcagaaccgccgggcatcctcagcctgcgt
gtagacccgttgagcgggcgcgctgccacacctagcacgccgaacgcgttcttcgaactg
ttcaaaagcgaagacacaccgccaagcgtcaacgaactgggcggcagcagcgcaccgggc
agcccgttgccagcggatgagtcagcaccgatcgacttgttctga
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