Pseudomonas amygdali: BKM19_004115
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Entry
BKM19_004115 CDS
T05354
Name
(GenBank) ATP-grasp domain-containing protein
KO
K11263
acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:
6.4.1.2
6.4.1.3
6.4.1.-
6.3.4.14
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00061
Fatty acid biosynthesis
pamg00074
Mycolic acid biosynthesis
pamg00280
Valine, leucine and isoleucine degradation
pamg00620
Pyruvate metabolism
pamg00630
Glyoxylate and dicarboxylate metabolism
pamg00640
Propanoate metabolism
pamg01100
Metabolic pathways
pamg01110
Biosynthesis of secondary metabolites
pamg01120
Microbial metabolism in diverse environments
pamg01200
Carbon metabolism
pamg01212
Fatty acid metabolism
Module
pamg_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
BKM19_004115
00630 Glyoxylate and dicarboxylate metabolism
BKM19_004115
00640 Propanoate metabolism
BKM19_004115
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BKM19_004115
00074 Mycolic acid biosynthesis
BKM19_004115
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
BKM19_004115
Enzymes [BR:
pamg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
BKM19_004115
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
BKM19_004115
6.4.1.3 propionyl-CoA carboxylase
BKM19_004115
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Biotin_lipoyl_2
Dala_Dala_lig_C
Peptidase_M23
RnfC_N
LAL_C2
ATPgrasp_ST
GCV_H
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
AVB12890
UniProt:
A0AB35QYM0
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Position
702162..703895
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AA seq
577 aa
AA seq
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MKKVLIANRGEIAVRIARACRDYGVASVAVYADADIDALHVCQADEAYGLQGERPTDTYL
NIEKLLAVAARAGADAVHPGYGFLSERADFARAVIDAGLTWIGPDPATIDALGDKVQARR
IALKVGAPLVAGTENPVKDASEVLAFAEQHGLPIAIKAAFGGGGRGLKVAWKLDEVSELY
ESAVREAVTAFGRGECFVERFLDRPRHIEAQIIADRHGRVIVVGTRDCSLQRRNQKLIEE
APAPYLNDELRQRIHNSARAVCAEAGYVGAGTVEFLLSGDGTLSFLEVNTRLQVEHPVTE
ETSGVDLVIEQLRVADGLPLSFDGTPVPRGHSFEFRINAEDAGNGFLPTPGSIDVFQPPS
GPGVRLDTGVTEGSRVSANFDSMIAKLIVTGATREQAISRARRALAEFKVEGVATVLPFH
RAVMDHDDFTASNTFAVHTRWIETDFAEHVTIAPRNAEPADPGVLRTFVEIDGKRHELGL
PAALLAGMSLNAAAPADASQPAADAPDPHAVLTPVAGNLHAWAVEDGATVEKGQVIAIME
AMKMETSILAPCAGTVQISKEPGGYLEAKVVIGRVEA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggttctgattgccaaccgtggcgaaattgccgtgcgtattgcccgcgcctgc
cgtgactatggggttgcctcggtggccgtgtatgccgatgccgatatcgacgcgctgcat
gtgtgtcaggccgatgaagcctacgggctgcaaggtgagcgcccgaccgacacctatctg
aacatcgaaaagctgctggcagtcgctgctcgtgccggtgccgacgcggttcacccgggg
tatggcttcctctcggaacgcgccgactttgcccgcgccgtgatcgacgccggcctgacc
tggatcggcccggaccctgcaaccatcgacgcattgggtgacaaggtgcaggcccggcgc
atcgctttgaaagtcggtgcgccgctggtagccggtactgaaaacccggtgaaagatgcc
tctgaggtgcttgcgttcgccgagcagcacggcctgccaattgccatcaaggccgccttt
ggcggcggtggtcgcggcttgaaggtggcctggaagctggatgaagtcagcgaactgtac
gagtctgccgtacgcgaggcagtaaccgcgtttggtcggggcgaatgttttgtcgaacgc
tttctggaccgtcctcgtcatatcgaagcgcagatcatcgccgaccgccacggccgcgta
atcgttgtcggcacccgcgactgctcgctgcaacgccgcaaccagaagctgatcgaagaa
gccccagcgccttacctgaatgatgaactgcgccagcgcattcacaattcggcccgtgcg
gtttgtgccgaggcaggctatgtcggtgccggtacggtggaattcctgctcagtggcgac
ggcaccctgtcattcctggaggtcaacacacgcttgcaggtcgaacacccggtgactgaa
gaaaccagcggtgtggatctggtcatcgagcaactgcgcgtggccgacggcctgccgctg
tcgttcgacggtacgccggtaccgcgcgggcacagcttcgaattccgcatcaacgccgaa
gatgcaggcaacggcttcctgccgacaccgggcagcatcgacgtgtttcagccaccgtcc
ggaccgggcgtgcggctggacaccggcgtgacagaaggctcgcgagtgtcagcgaacttc
gattcgatgatcgccaaactgatcgtcaccggcgcaacccgcgagcaagccatcagtcgc
gcccgccgcgccctggccgagttcaaggtggaaggcgtggccaccgtgctgccgttccat
cgggcggtcatggaccatgatgacttcacggcgtccaatacctttgccgtccacacccgc
tggatcgaaacagacttcgccgagcacgtcaccatcgccccgcgcaacgcagaaccggcc
gacccgggcgtgctgcgcaccttcgttgaaatcgacggcaaacgccacgaactgggcctg
cctgctgcgctgctggccggtatgagcctgaacgctgccgcaccggctgacgccagccag
ccagctgccgacgcccctgacccgcacgcagtactgacgccggtcgcgggcaacctgcat
gcctgggcggttgaagacggtgcgacggtagagaagggacaggtgatcgccatcatggag
gcgatgaagatggaaacatcgatactggcgccgtgtgccggaaccgtgcagatcagcaag
gagcctggcgggtatctggaggcgaaggtggtgattgggcgggttgaggcctga
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