KEGG   Pseudomonas amygdali: BKM19_004115
Entry
BKM19_004115      CDS       T05354                                 
Name
(GenBank) ATP-grasp domain-containing protein
  KO
K11263  acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
Organism
pamg  Pseudomonas amygdali
Pathway
pamg00061  Fatty acid biosynthesis
pamg00074  Mycolic acid biosynthesis
pamg00280  Valine, leucine and isoleucine degradation
pamg00620  Pyruvate metabolism
pamg00630  Glyoxylate and dicarboxylate metabolism
pamg00640  Propanoate metabolism
pamg01100  Metabolic pathways
pamg01110  Biosynthesis of secondary metabolites
pamg01120  Microbial metabolism in diverse environments
pamg01200  Carbon metabolism
pamg01212  Fatty acid metabolism
Module
pamg_M00082  Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00620 Pyruvate metabolism
    BKM19_004115
   00630 Glyoxylate and dicarboxylate metabolism
    BKM19_004115
   00640 Propanoate metabolism
    BKM19_004115
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    BKM19_004115
   00074 Mycolic acid biosynthesis
    BKM19_004115
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    BKM19_004115
Enzymes [BR:pamg01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.14  biotin carboxylase
     BKM19_004115
  6.4  Forming carbon-carbon bonds
   6.4.1  Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
    6.4.1.2  acetyl-CoA carboxylase
     BKM19_004115
    6.4.1.3  propionyl-CoA carboxylase
     BKM19_004115
SSDB
Motif
Pfam: CPSase_L_D2 Biotin_carb_N Biotin_carb_C Biotin_lipoyl ATP-grasp Biotin_lipoyl_2 Dala_Dala_lig_C Peptidase_M23 RnfC_N LAL_C2 ATPgrasp_ST GCV_H ATP-grasp_3
Other DBs
NCBI-ProteinID: AVB12890
UniProt: A0AB35QYM0
LinkDB
Position
702162..703895
AA seq 577 aa
MKKVLIANRGEIAVRIARACRDYGVASVAVYADADIDALHVCQADEAYGLQGERPTDTYL
NIEKLLAVAARAGADAVHPGYGFLSERADFARAVIDAGLTWIGPDPATIDALGDKVQARR
IALKVGAPLVAGTENPVKDASEVLAFAEQHGLPIAIKAAFGGGGRGLKVAWKLDEVSELY
ESAVREAVTAFGRGECFVERFLDRPRHIEAQIIADRHGRVIVVGTRDCSLQRRNQKLIEE
APAPYLNDELRQRIHNSARAVCAEAGYVGAGTVEFLLSGDGTLSFLEVNTRLQVEHPVTE
ETSGVDLVIEQLRVADGLPLSFDGTPVPRGHSFEFRINAEDAGNGFLPTPGSIDVFQPPS
GPGVRLDTGVTEGSRVSANFDSMIAKLIVTGATREQAISRARRALAEFKVEGVATVLPFH
RAVMDHDDFTASNTFAVHTRWIETDFAEHVTIAPRNAEPADPGVLRTFVEIDGKRHELGL
PAALLAGMSLNAAAPADASQPAADAPDPHAVLTPVAGNLHAWAVEDGATVEKGQVIAIME
AMKMETSILAPCAGTVQISKEPGGYLEAKVVIGRVEA
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgaaaaaggttctgattgccaaccgtggcgaaattgccgtgcgtattgcccgcgcctgc
cgtgactatggggttgcctcggtggccgtgtatgccgatgccgatatcgacgcgctgcat
gtgtgtcaggccgatgaagcctacgggctgcaaggtgagcgcccgaccgacacctatctg
aacatcgaaaagctgctggcagtcgctgctcgtgccggtgccgacgcggttcacccgggg
tatggcttcctctcggaacgcgccgactttgcccgcgccgtgatcgacgccggcctgacc
tggatcggcccggaccctgcaaccatcgacgcattgggtgacaaggtgcaggcccggcgc
atcgctttgaaagtcggtgcgccgctggtagccggtactgaaaacccggtgaaagatgcc
tctgaggtgcttgcgttcgccgagcagcacggcctgccaattgccatcaaggccgccttt
ggcggcggtggtcgcggcttgaaggtggcctggaagctggatgaagtcagcgaactgtac
gagtctgccgtacgcgaggcagtaaccgcgtttggtcggggcgaatgttttgtcgaacgc
tttctggaccgtcctcgtcatatcgaagcgcagatcatcgccgaccgccacggccgcgta
atcgttgtcggcacccgcgactgctcgctgcaacgccgcaaccagaagctgatcgaagaa
gccccagcgccttacctgaatgatgaactgcgccagcgcattcacaattcggcccgtgcg
gtttgtgccgaggcaggctatgtcggtgccggtacggtggaattcctgctcagtggcgac
ggcaccctgtcattcctggaggtcaacacacgcttgcaggtcgaacacccggtgactgaa
gaaaccagcggtgtggatctggtcatcgagcaactgcgcgtggccgacggcctgccgctg
tcgttcgacggtacgccggtaccgcgcgggcacagcttcgaattccgcatcaacgccgaa
gatgcaggcaacggcttcctgccgacaccgggcagcatcgacgtgtttcagccaccgtcc
ggaccgggcgtgcggctggacaccggcgtgacagaaggctcgcgagtgtcagcgaacttc
gattcgatgatcgccaaactgatcgtcaccggcgcaacccgcgagcaagccatcagtcgc
gcccgccgcgccctggccgagttcaaggtggaaggcgtggccaccgtgctgccgttccat
cgggcggtcatggaccatgatgacttcacggcgtccaatacctttgccgtccacacccgc
tggatcgaaacagacttcgccgagcacgtcaccatcgccccgcgcaacgcagaaccggcc
gacccgggcgtgctgcgcaccttcgttgaaatcgacggcaaacgccacgaactgggcctg
cctgctgcgctgctggccggtatgagcctgaacgctgccgcaccggctgacgccagccag
ccagctgccgacgcccctgacccgcacgcagtactgacgccggtcgcgggcaacctgcat
gcctgggcggttgaagacggtgcgacggtagagaagggacaggtgatcgccatcatggag
gcgatgaagatggaaacatcgatactggcgccgtgtgccggaaccgtgcagatcagcaag
gagcctggcgggtatctggaggcgaaggtggtgattgggcgggttgaggcctga

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