Pseudomonas amygdali: BKM19_004295
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Entry
BKM19_004295 CDS
T05354
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BKM19_004295 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pamg02000
]
BKM19_004295 (msbA)
Enzymes [BR:
pamg01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
BKM19_004295 (msbA)
Transporters [BR:
pamg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BKM19_004295 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
ABC_ATPase
RsgA_GTPase
AAA_29
NB-ARC
nSTAND3
MMR_HSR1
DUF3584
nSTAND1
DUF815
APS_kinase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AVB12923
UniProt:
A0AB35QZZ0
LinkDB
All DBs
Position
761554..763356
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AA seq
600 aa
AA seq
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MTTSESSSTSSVKIYFRLLSYVRPYVGIFLLSIIGFVIFASTQPMLAGILKYFVDGLTNP
EAVLFPNVPYLRELQLLQAVPLLIVLIAAWQGLGSFLGNYFLAKVSLGLVHDLRVELFNK
LLVLPNRYFDTTNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFIYLLMMNWKL
TLVMLAILPLIAVMVGSASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGESYEQ
NRFAQASDSNTRKQLRMTKTGAIYTPMLQLVIYSAMAVLMFLVLFLRGDATAGDLVAYIT
AAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVEEEVDTGTIERDRVAGHLEVKNLSF
FYPQTERQVLNDISFSAAPGQMIALVGRSGSGKSTLANLIPRFYGHEMGNILLDGVEIND
YRLRNLRRHIAQVNQNVTLFNDTIANNIAYGDLAGAPRADIEAAAADAYAKEFIDQLPQG
FDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMKG
RTTLVIAHRLSTIEKADMILVMDAGQIVERGTHTELLAQNGYYARLHAMGLDEPAPVGAV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacaacctccgaatcgtcctcgacttccagcgtgaaaatctatttccgtctgttgtct
tatgtgcgtccgtatgtgggcatcttcctgctcagcatcattggtttcgtgatcttcgcc
tcgacccagccgatgcttgccggcatcctcaaatattttgtcgatggcctgaccaaccct
gaagccgtgctgttccccaatgtgccttatctgcgtgagctgcaactgttgcaggcagtg
ccgttgctgatcgttctgatcgccgcatggcaggggcttggctctttcctgggtaactac
ttcctggccaaggtgtctctcgggttggtccatgacctgcgggtggagctgttcaacaag
ttgctggtactgcccaatcgttacttcgatacgaccaactccggccacctgatttcgcgt
atcacgttcaacgtcacgatggtcaccggtgccgccaccgatgccatcaaagtggtgatt
cgtgaagggctgaccgtggtgttcctgttcatctacctgttgatgatgaactggaagctg
actctggtcatgctcgccatcctgccgctgattgccgtcatggtcggcagtgcaagcaag
aaattccgcaagcagagcaagaagattcaggtagcgatgggcgatgttacgcacgttgcc
tcggaaaccattcagggctatcgcgtggtacgcagcttcggtggcgagtcctacgaacag
aaccgcttcgctcaggccagtgacagcaacacgcgcaaacaactgcgcatgaccaaaacc
ggtgccatctatacgccgatgctgcaactggtgatctacagcgccatggcggtgctgatg
tttctggtgctgttcctgcgaggcgatgctaccgcgggcgatctggttgcctatatcact
gctgccggtctgctgcccaagccgattcgccagctgtcggaagtcagttcgacgatccag
aaaggcgtcgccggtgccgagagcatcttcgaacaactggacgtggaagaagaagtcgac
accggcacgatcgagcgtgatcgcgtggccggccacctggaggtgaagaacctcagcttc
ttctacccgcagaccgagcgtcaggtgttgaacgacatcagtttctccgcagcgcctggg
cagatgattgcgctggtaggccgttccggcagcggtaaatcgaccctggccaacctgata
ccgcgtttttacgggcacgagatgggcaacatcctgctcgatggcgtcgaaatcaacgac
taccgtttgcgcaacctgcgcaggcacatcgcccaggtcaaccagaacgtcacgctgttc
aacgacacgatcgccaacaacattgcctatggtgatctggcaggtgctccacgtgccgac
atcgaagcggccgccgccgatgcctacgccaaagagttcatcgaccagttgccgcagggg
ttcgatactcaggtgggcgaaaacggcgtgctgctgtccggtggtcagcggcagcgtctg
gccattgctcgcgcactgcttaaaaacgcaccgctgctgatcctcgacgaagctacatcg
gcgctcgacaccgagtccgaacgccacatccaggcggccctggatcacgtcatgaagggc
cgaaccacgctagtcatcgctcaccgcctttcgaccatcgaaaaggccgacatgattctg
gtcatggacgccgggcagatcgtcgagcgcggcacgcataccgagctgttggcacagaac
ggctattacgcccgtctgcatgccatggggctggacgagccggcacctgtcggcgcagtc
tga
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