Pseudomonas amygdali: BKM19_004340
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Entry
BKM19_004340 CDS
T05354
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00730
Thiamine metabolism
pamg01100
Metabolic pathways
pamg01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BKM19_004340
Enzymes [BR:
pamg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
BKM19_004340
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AVB12931
UniProt:
A0AB35QUZ2
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All DBs
Position
771722..773611
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AA seq
629 aa
AA seq
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MSTTLKNAAHLSESAQVDSGSVQPFTRSQKIYVQGSRPDIRVPMREITLDVTPTDFGGEI
NAPVTVYDTSGPYTDPKVIIDVRKGLADVRSPWIDSRNDTERLPGLSSNFGQQRLSDAEL
TALRFAHVRNPRRAKAGANVSQMHYARQGIITAEMEYVAIRENMKLQEARAAGLLTQQHA
GHSFGASIPKEITAEFVREEIARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALG
SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGA
AEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAH
HQENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDAAQFGELETLGELTKIAWKH
DVQTMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG
WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFE
FRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRI
EAVDVDVAKGLAEQAERFKQEGSQLYKKV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaacactaaaaaacgcagcccatttgagcgagtcggcacaagtcgattccgga
tcggtacagccgtttacccgttcgcagaaaatctacgttcagggctcacgcccggacatc
cgcgtgccgatgcgcgaaatcaccctggacgtcacaccgactgactttggcggcgagatc
aacgcgccggtcacggtctatgacacctccggcccgtacaccgaccccaaagtgatcatc
gacgtgcgtaaaggcctggcggatgttcgctcgccgtggatcgactcgcgcaatgacacc
gagcgtctgcccggcctgagttccaacttcggccagcaacgcctgagcgacgccgaactg
actgcgctgcgctttgctcatgtgcgcaacccgcgccgggccaaggcgggggccaacgtc
agccagatgcactatgcgcgtcagggcatcattaccgccgagatggaatacgttgccatc
cgcgaaaacatgaagcttcaggaagcccgtgccgctggcctgctgacccagcagcatgcg
gggcacagcttcggcgcgagcatcccgaaggaaatcactgccgagttcgtgcgcgaagag
atcgcccgtggtcgcgcgatcatcccggccaacatcaaccacgtcgaactggaaccgatg
attatcggccgcaacttcctggtgaagatcaacggcaacatcggtaacagcgcgctggga
tcttccatcgaagaagaagtcgccaagctgacctggggcattcgctggggttctgacacg
gtcatggacctgtctaccggcaagcatattcatgaaacccgtgaatggatcatccgcaac
tcgccggtgccgattggcacggtgccgatctatcaggctctggaaaaagtcggcggtgcg
gccgaggatctgacctgggagctgttccgcgacacactgatcgagcaggccgagcagggc
gttgattacttcaccatccacgccggtgtgttgctgcgttatgtgccgctgaccgccaag
cgtgtgaccgggattgtcagccgtggtggttcaatcatggccaagtggtgcctggcgcat
caccaggaaaacttcctgtacacccatttcgaagacatctgcgaaatcatgaaggcttat
gacgtcagcttctcgctgggcgatggtttgcgtcctggctcgattgccgacgccaacgat
gcggcgcagttcggtgagctggaaaccttgggtgaactgaccaagatcgcctggaagcac
gacgtgcagaccatgattgaaggccccggtcatgtgccgatgcagttgatcaaggaaaac
atggacaagcagctggaatgctgcgacgaagcgccattttacacccttggcccgctgacc
accgatattgcgccggggtatgaccacatcacgtcgggcatcggtgccgcgatgattggc
tggttcggttgcgccatgctgtgctacgtcacgcccaaagagcacctggggctgccgaat
aaggatgacgtgaagaccgggatcatcacctacaagattgctgcccacgcagcggacctt
gccaaaggccatccgggcgcgcagatccgtgacaacgccttgagcaaggcgcgtttcgag
ttccgctgggaagaccagttcaaccttggcctggacccggacaccgcgcgctcgtaccac
gacgaaaccctgcccaaggactcggccaaggtcgcgcatttctgttccatgtgcgggccg
aaattctgctcgatgaaaatcactcaggaagtacgcgagtacgccgccaaccagcggatc
gaagcagtcgacgtcgatgtagccaaaggcctggccgagcaggccgagcgcttcaagcag
gaaggcagccagttgtacaagaaggtgtag
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