KEGG   Pseudomonas amygdali: BKM19_004380
Entry
BKM19_004380      CDS       T05354                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
pamg  Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pamg03032]
    BKM19_004380 (parE)
   03036 Chromosome and associated proteins [BR:pamg03036]
    BKM19_004380 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pamg02048]
    BKM19_004380 (parE)
Enzymes [BR:pamg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BKM19_004380 (parE)
DNA replication proteins [BR:pamg03032]
 Prokaryotic type
  DNA Topoisomerases
   BKM19_004380 (parE)
Chromosome and associated proteins [BR:pamg03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    BKM19_004380 (parE)
Prokaryotic defense system [BR:pamg02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    BKM19_004380 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_2 TOPRIM_C HATPase_c_3
Other DBs
NCBI-ProteinID: AVB12939
LinkDB
Position
779456..781360
AA seq 634 aa
MANPSASSYNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHARSVQ
VILHADNSLEVSDDGRGMPVDIHPEEGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGI
SVVNALSTQVRVRVKRDGNEYEMTFADGYKATELAVIGTVGKRNTGTSVYFAPDPKYFDT
PKFSVSRLKHVLKAKAVLCPGLLVSFEDKSTNEKVEWHYEDGLRSYLQDSVSDFLRLPDE
PFCGSFAGNKEAVDWALLWLPEGGDSVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCE
FRNLLPRGVKLAPEDVWERIAFVLSMKMQEPQFSGQTKERLSSREAAAFVSGVVKDAFSL
WLNTHSELGLQLADLAINNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPARSELFL
VEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGGEVLASQEVHNIAVAIGVDPGAAD
ISQLRYGKICILADADSDGLHIATLLCALFVQHFRPLVDAGHVYVAMPPLYRIDLGKEIY
YALDESERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLDDF
AATSEMMDMLLAKKRAGDRKSWLESKGNLAEVLT
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggccaatcccagcgctagctcttataacgcagacgccatcgaagtcctctcgggcctc
gatccggttcgcaaacgtccgggcatgtacaccgacacctcgcggcccaaccacctggct
caggaagtcatcgacaacagtgtcgacgaagctctggctggtcacgcgcgctcggtacag
gtcatccttcatgccgacaactcgcttgaggtgtccgacgacggccgcggcatgccggtg
gacattcacccggaagaaggtgtgtccggcgtcgagctgatcctcaccaagctgcatgcg
ggtggcaagttctccaacaagaactaccagttctccggcggcctgcacggcgtagggatt
tccgtggtcaacgcgctttccactcaggttcgggtgcgggtcaagcgcgatggcaacgaa
tatgaaatgaccttcgccgacggctacaaggccacagagctggcggttatcggcactgtc
ggcaagcgcaacaccgggaccagcgtctatttcgcgcccgatccgaagtatttcgatacc
ccgaagttctccgtcagtcgtctcaagcacgtactcaaggccaaggcggttctgtgcccg
ggcctgctggtcagctttgaagacaagtccactaacgaaaaagtcgagtggcattacgaa
gacggcttgcgctcgtatctacaggattcggtcagcgacttcctgcgactgccggacgaa
ccgttctgcggcagcttcgccggtaacaaggaagcggtcgactgggcgttgctctggctg
cccgaaggtggcgacagcgttcaggaaagctacgtcaacctgatccctaccgcgcagggt
ggcacccatgtgaacggcttgcgccagggcttgctggatgcgatgcgcgagttctgcgag
ttccgcaacctgttgccgcgtggcgtcaagctggcaccggaagatgtctgggagcgaatt
gccttcgtcctgtcgatgaaaatgcaggagccgcagttctccgggcagaccaaggaacgt
ctgtcgtcccgtgaggcggcggcgttcgtttccggcgtggtcaaggacgcgttcagtctg
tggctcaatacccactcggagctgggcctgcaactggctgacctggcgatcaacaacgcc
ggtcgccgcctcaaggccagcaagaaggttgaacgcaagcgcattacccaaggccccgcg
ttgccgggcaagctggctgactgtgccggacaggatccggcgcgctccgagctgtttctg
gtcgaaggtgattccgccggtggttcggccaagcaggcgcgggacaaggaattccaggcc
atcctgcccctgcgcggcaagattctgaatacctgggaagtggacggcggcgaagtgctc
gccagccaggaagtgcacaacatcgcggttgccatcggggttgatccgggcgcggcggac
atcagccagttgcgttacggcaaaatctgtattctcgccgacgccgactcggatggtttg
cacatcgccaccttgctgtgtgcgttgttcgtccagcacttccgcccgctggtcgacgcc
gggcatgtgtatgtggccatgccgccgctgtaccggatcgaccttggcaaggaaatctac
tacgcgctggacgaaagcgagcgcgacggaattcttgaccgtctggtggctgaaaagaaa
cggggcaaaccacaggtcacccgattcaagggcctgggtgaaatgaacccgccgcaattg
cgcgaaaccaccatggacccgaacacacggcgtctggtgcagctcacgctggatgatttc
gctgctacgtcggaaatgatggacatgttgctggcgaagaaacgtgcaggtgatcgcaag
tcctggcttgaatcgaagggcaacctcgccgaggtcctgacttga

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