KEGG   Pseudomonas amygdali: BKM19_005990
Entry
BKM19_005990      CDS       T05354                                 
Symbol
traD
Name
(GenBank) conjugative coupling factor TraD, PFGI-1 class
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
pamg  Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pamg02044]
    BKM19_005990 (traD)
Secretion system [BR:pamg02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   BKM19_005990 (traD)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87
Other DBs
NCBI-ProteinID: AVB13206
LinkDB
Position
complement(1094675..1096834)
AA seq 719 aa
MAHDYAIESLLRPAVELYTVYVCAAGAFLCVFAPWAFALTPLFGIVTAAGFLALGLLRLK
QAWQVLRYRRNIRRLPHYTMTSKEVPVSNQRLFIGLGFRWQQRHTQRLMDTYLPKYASYV
EATSLFRAARRFEERAEFAPYPVRLLARATSWDVPINPVRPLPPVGGLPRLHGIEPYEEN
VSLPLSERVGHSIVLGTTRVGKTRLAELFITQDIRRKKHGQHEVVIVFDPKGDADLLKRM
YLEAKRAGRLNEFYVFHLGWPDHSARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREFA
WRFVNIIARALVALGRRPDYLQIQQHVINIEGIFQEYASKYFDESDPKAWEAIVAIEGKL
NEKNVPFNMKGRPFRVVAIDQYLSQTRVADPVMDGLRSAVRYDKTYFDKIVASLLPLLEK
LTTGRMAELISPDYQDVNDPRPIFDWMQVVRKKAVVYIGLDALSDTEVAAAVGNSMFSDL
VSVAGHIYKFGVDDGLPGGVPGTKVPINLHADEFNELMGEEFIPMINKGGGAGMQVTAYT
QTMSDIEAKIGNKAKAGQVIGNFNNVFMLRVRETSTAELLTNQLPKVQVFTSTPASSAND
SATGNTAFTSSSHDQVQQVSVPMIEPAHVVGLPKGQCFALMEGGNLWKIRMPLPGHDPDE
VMPADLQALAESMRQTYQVGKVDDTGWWSAPGYQKLNESLPADLLDDFKKIGVAPEDAA
NT seq 2160 nt   +upstreamnt  +downstreamnt
atggctcatgattacgccatcgaatccctgctcagacccgccgttgagctgtacaccgtg
tacgtgtgcgctgcaggtgcttttctatgcgtgttcgcgccctgggcgttcgcgctgact
ccgctgttcggcatcgtgacggctgcgggctttctggctttggggttattgcgcctgaaa
caagcatggcaggtgctgcgctatcgccgaaacatccgtcgactgcctcattacacgatg
accagtaaagaagtgccggtcagcaatcaacgtctgttcatcggtcttggctttcgctgg
cagcaacgccatacccagcggctgatggacacttacctgccgaagtacgccagctacgtt
gaagccacctcactgttccgcgcagcgcgccgctttgaggagagagcggagttcgctccc
taccctgtccgtcttctggccagagccacatcatgggacgtgcccatcaatccagtgcga
cctctgccacccgtcggcggcttgccacggctgcacggcatcgagccatacgaggagaac
gtctctctccctttgagtgagcgggtaggccattcgattgttctgggtaccacccgtgtc
ggaaaaacgcgcctggctgaattgttcatcactcaggacatccggcgaaaaaagcacggc
cagcacgaggtcgtcatcgtcttcgacccgaagggcgatgccgatctgctcaaacgcatg
tatctggaagccaaacgcgccggacgcctgaacgaattctatgtgttccacctgggctgg
ccggatcactcggcacgctataacgccgttgggcgttttggccggatttcggaggtggcc
acccggatcgctggtcagctctccggcgaaggaaactcggcagcgttccgtgaattcgcc
tggcgtttcgtgaacatcatcgcaagagcccttgtcgcattgggccgccgacctgactac
ctgcagatccagcagcacgtgatcaacatcgaagggatcttccaggagtatgcctctaaa
tactttgatgagtctgacccaaaggcctgggaggcgatcgtcgccattgagggcaagctc
aacgagaaaaacgtaccgttcaacatgaagggccggccatttcgcgtggtggccatcgat
caatacctgtctcagacgcgcgtggcagatccagtgatggatggactgcgcagtgcggtc
cgctatgacaagacctatttcgacaaaatcgtcgcctcgctactgccgttgcttgagaag
cttacaaccgggcgaatggcggaactgatctcgcctgactatcaggacgtgaatgaccct
cgacccatcttcgactggatgcaggtggtccgcaaaaaggccgtggtctacatcggtctg
gacgccttgtccgacactgaggtcgccgctgccgtcggcaactcgatgttctccgacctg
gtctctgtcgctggccatatctacaagttcggcgtcgacgacggactaccgggcggcgtc
cctggcaccaaagtgcctatcaaccttcacgccgatgagttcaacgagctgatgggtgag
gaattcattccgatgatcaacaagggtggcggtgccggcatgcaggtgactgcgtacacc
cagaccatgagcgatatcgaagcgaagatcggcaacaaggccaaagccggccaggtgatc
ggtaacttcaacaacgtgttcatgctgcgcgtccgcgaaacgtccaccgccgagttgctc
acaaaccagttgccaaaggttcaggttttcacatccaccccagccagctcggcgaatgac
agtgcaacgggcaataccgcgttcacatcctccagtcatgaccaggtgcagcaggtcagc
gtgccaatgattgagcccgcgcacgtcgtcggcctgcccaagggccaatgctttgcgctc
atggaaggcggcaatctgtggaaaatcagaatgcctttgccagggcatgatcctgatgag
gtgatgccggcagatctgcaggccctggctgaaagcatgcgtcagacgtatcaggtgggc
aaggtcgacgacactggctggtggtcagcgcctggttatcagaagctcaacgagtcgctg
cctgcagatctgctcgacgacttcaaaaaaatcggtgttgcacctgaggacgcggcatga

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