Pseudomonas amygdali: BKM19_006020
Help
Entry
BKM19_006020 CDS
T05354
Name
(GenBank) IS3 family transposase
KO
K07497
putative transposase
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
BKM19_006020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
HTH_Tnp_1
rve_3
HTH_21
rve_2
DDE_Tnp_IS240
HTH_28
HTH_29
HTH_23
DUF3847
PUMA_CC
TSC22
Motif
Other DBs
NCBI-ProteinID:
AVB13211
UniProt:
A0AB35R6I4
LinkDB
All DBs
Position
complement(join(1100227..1101134,1101134..1101389))
Genome browser
AA seq
387 aa
AA seq
DB search
MTKQRRTFSIEFKREAAGLVLDQGYSHIEASRSLGVVESALRRWVSQLQQERNGVTPQSK
ALTPEQQKIQELEARIARLEREKSIFKKGYRALDVGRTRAHALIDQLGAHEPIELLCEAF
EIPRSCYYDHCLRRRAPDPERVRLLSRVNELFGKSRSAAGSRSIVSMMQEDGEQIGRFKV
RGLMRELGLISKQPGSHTYKHATEERPDIPNILNREFDVPAPNQVWCGDITYIWAQGKWH
YLAVVMDLYARRIVGWAFSNKPDTDLVIKALDMAYEQRGKPQGLLFHSDQGAQYGSRQFR
QRLWRCRIRQSMSRRGNCYDNSPMERVFRSLKTEWIPTVGYMTAQEAQRDISHYLMHRYN
WIRPHQFNDGLAPAQYEKNLNVVSGMS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacaacgccgtaccttttccattgaattcaaacgcgaggccgcaggcctcgtg
ctcgatcaaggctatagccacatcgaagcctcccgttcgcttggggtggtcgagtctgcg
ctgcgtcgttgggtgagccaactccagcaggagcgcaatggcgtaacgcctcagagcaaa
gccctgacgccagagcagcagaaaatccaggaactagaagcccggatcgcccgtcttgag
cgggagaaatccatttttaaaaaaggctaccgcgctcttgatgtcggaagaacacgagcg
catgcgctgatcgatcagctcggtgcccatgagccgatcgagttgctgtgcgaagcgttc
gagatacctcgctcgtgctactacgaccattgcctgcgacgccgggctccagaccccgag
cgggttcgtttactcagccgagtcaatgagctgttcgggaaaagtcgaagcgctgccggc
agccgcagtatcgtgtcgatgatgcaggaggatggcgagcaaatcggtcggttcaaggtg
cgtggcctgatgcgggaactgggattaatcagcaagcaaccaggctcgcatacttataaa
cacgcaacagaggagcggcctgatattccgaatattttgaatcgggagttcgatgtaccc
gcgcccaatcaggtctggtgtggcgacatcacctacatctgggcgcaagggaaatggcat
tacctggcagtggttatggatctttatgcgcgtcggattgtgggttgggcgttttcgaac
aagccggatacggacttggtgatcaaggcgctggacatggcttatgagcaacgcggcaag
cctcagggcctgctgtttcactccgaccagggcgcccaatacgggagccgacagtttcgc
cagcggctttggcgatgccgcatacgccagagcatgagtcgccgaggtaattgctacgac
aactcgccgatggagcgtgtattccgcagtttgaaaactgaatggataccgaccgtgggc
tacatgacggcccaagaggctcagcgggatatcagtcattatctgatgcatcgctacaac
tggattcggccacaccagttcaatgatggactggcgcccgctcagtacgagaaaaacctt
aacgtcgtgtccgggatgagttga
DBGET
integrated database retrieval system
