Pseudomonas amygdali: BKM19_008280
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Entry
BKM19_008280 CDS
T05354
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00260
Glycine, serine and threonine metabolism
pamg00630
Glyoxylate and dicarboxylate metabolism
pamg00670
One carbon pool by folate
pamg00785
Lipoic acid metabolism
pamg01100
Metabolic pathways
pamg01110
Biosynthesis of secondary metabolites
pamg01200
Carbon metabolism
Module
pamg_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BKM19_008280 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BKM19_008280 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BKM19_008280 (gcvP)
00670 One carbon pool by folate
BKM19_008280 (gcvP)
Enzymes [BR:
pamg01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
BKM19_008280 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF7317
Motif
Other DBs
NCBI-ProteinID:
AVB13602
UniProt:
A0AB35R804
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All DBs
Position
complement(1562478..1565342)
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AA seq
954 aa
AA seq
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MTDRIELTTANEFIARHIGPRAADEQAMLQTLGFDSIEALSESVIPESIKGTSVLNLPAG
QSEADALASIKAIAGKNQLFKTYIGQGYYNTHTPAPILRNLLENPAWYTAYTPYQPEISQ
GRLESLLNFQTLISDLTGLPIANASLLDEATAAAEAMTFCKRLSKNKGSQQFFASSHCHP
QTLDVLRTRAEPLGITVVVADEAELGDVSDYFGALLQYPASNGDVFDYRELVERFHAANA
LVAVAADLLALTLLTPPGEFGADVAIGSAQRFGVPLGFGGPHAAYFSTRDAFKRDMPGRL
VGVSVDRHGKQALRLAMQTREQHIRREKATSNICTAQVLLANIASMYAVYHGPRGLTQIA
KRVHQLTAILAEGLSTLGLKAEQAFFFDSLTLNTGSRTAALHAAARARHINLREIDDQHL
GLSLDETTSQSAVETLWEIFASDAQNLPDFTALAASVPSRLPAALLRQSAILSHPVFNRY
HSETELMRYLRKLADKDLALDRTMIPLGSCTMKLNAASEMIPVTWAEFGNLHPFAPAEQS
AGYQQLTDELEAMLCAATGYDAISLQPNAGSQGEYAGLLAIRAYHQSRGDEHRDICLIPS
SAHGTNPATANMAGMRVVVTACDARGNVDIEDLRAKAVQHRDQLAAIMITYPSTHGVFEE
GIREICGIVHDNGGQVYIDGANMNAMVGLCAPGKFGGDVSHLNLHKTFCIPHGGGGPGVG
PIGVKSHLAPFMPGHARMERKEGAVCAAPFGSASILPITWMYIRMMGGEGLKRASQLAIL
NANYISRRLEEHYPVLYTGTNGLVAHECILDLRPIKDSSGISVDDVAKRLIDFGFHAPTM
SFPVAGTLMIEPTESESREELDRFCDAMIKIREEIRAVENGTLDKDDNPLKNAPHTAAEI
VGQWSHPYSREQAVYPVDSLIENKYWPPVGRVDNVFGDRNLVCACPSIESYQEA
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccgtattgaactgaccactgccaacgaattcatcgcccgtcacattggcccg
cgcgctgccgacgaacaggccatgttacagacgctgggtttcgactccattgaagcgctg
agcgaaagcgttatcccggaaagcatcaagggcaccagcgtgctgaacctgcctgccggg
cagagtgaagccgatgcgctggcgtccatcaaggccatcgccggcaaaaatcaactgttc
aagacctacatcggccagggttactacaacacccacacgccggccccgattctgcgcaac
ctgctggaaaacccggcctggtacaccgcctatacgccctatcagccggagatttcccaa
ggtcgtctggagtcgctgctcaattttcagacgctgatcagcgacctgaccggcctgccg
attgccaacgcgtccttgctcgacgaagcgaccgctgctgccgaagcaatgaccttttgc
aaacgtttgagcaagaacaaaggcagccagcagtttttcgcctccagccactgccacccg
cagacacttgatgtgttgcgtacccgtgccgagccattgggcattaccgttgtggtggcg
gacgaagccgagttgggcgacgtcagcgattactttggcgcgttgctgcaatacccggcc
agcaacggcgacgtgttcgattaccgcgagctggtcgaacgtttccatgctgccaacgcg
ctggtcgccgtggctgccgacttgctggcactgacgttgctgaccccgccaggcgaattt
ggcgccgacgtggccatcggcagcgcacaacgcttcggtgtaccgctgggcttcggcggc
ccgcatgcggcttacttctcgacccgcgatgccttcaagcgcgacatgccgggccgcctg
gtcggcgtatcggtggaccgtcacggcaagcaggccctgcgtcttgccatgcagacccgc
gaacagcatattcgtcgcgagaaggccaccagcaacatttgcactgcgcaggtgctgctg
gccaacatcgccagcatgtacgccgtctaccacggcccgcgcggcctgacacaaatcgcc
aaacgcgttcaccagttgaccgcgatccttgccgaaggcttgagcacgctgggtctgaag
gccgagcaggcattcttcttcgacagcctgacccttaacaccggcagtaggaccgctgcg
ctgcacgcagcggctcgcgccaggcacatcaacctgcgtgaaatcgacgaccagcatctg
ggtctgtcactggacgaaaccacctcgcagtcggcagttgaaacgctgtgggaaatcttc
gccagcgacgctcagaacctgccggacttcaccgcgctggcagccagcgtcccgtcgcgc
ctgcccgctgcgctgctgcgccagtcggcaatcctcagccacccggtgttcaaccgctac
cactctgaaaccgaactgatgcgctacctgcgcaagctggccgacaaggacctggcgctg
gaccgcaccatgattccactgggctcgtgcaccatgaagctcaacgccgccagcgaaatg
atcccggtgacctgggccgaattcggcaacctgcacccgttcgccccggccgagcaaagt
gccgggtatcaacaattgaccgacgagctagaggccatgctctgtgcggccaccggctat
gacgcaatctcgctgcaaccgaacgccggctcccagggtgaatatgccggcctgctggcc
atccgcgcttatcaccagagccgtggcgatgagcatcgcgatatctgcctgatcccttca
tcggcacacggcaccaacccggccacagccaacatggccggtatgcgtgtcgtggtcacc
gcctgcgatgcacgtggcaacgtcgatatcgaagacctgcgcgccaaggccgttcaacac
cgcgaccagcttgcggcgatcatgatcacctacccgtcgacccacggcgtgttcgaagaa
ggcatccgtgaaatctgcggtatcgttcacgacaacggtggccaggtctacattgacggc
gccaacatgaacgccatggtcggcctgtgcgctccgggcaaattcggtggcgatgtatcg
cacctcaacctgcacaagaccttctgcattccgcacggtggcggtggcccaggcgttggt
ccgatcggcgtcaaatcccatctcgccccgttcatgccgggccatgcacgcatggagcgc
aaggaaggcgcagtctgcgcagccccgttcggcagcgccagcatcctgccaatcacctgg
atgtacatccgcatgatgggcggcgaaggcctgaaacgcgcttcgcaactggcgatcctc
aacgccaactacatttcgcgccgcctggaagagcactacccggtgctgtacaccggcacc
aacgggctggttgcccacgaatgcatccttgacctgcgccctatcaaggacagcagcggc
atcagcgtcgatgacgtggccaagcgtctgatcgactttggcttccatgccccgaccatg
tcgttcccggttgccgggaccttgatgatcgagccgaccgagagcgagtccagagaggaa
ctggaccgtttctgcgacgccatgatcaagatccgtgaagaaatacgcgcggttgaaaac
ggcacactggacaaagacgacaacccgttgaaaaacgcaccgcacaccgctgcggaaatc
gtcggccagtggagccatccttacagccgcgaacaggcggtgtatccggttgattcgttg
atcgagaacaagtactggcctccggtcggccgtgtcgacaacgtcttcggcgaccgcaat
ctggtctgtgcctgcccgtccatcgagagctatcaggaagcctga
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