Pseudomonas amygdali: BKM19_008465
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Entry
BKM19_008465 CDS
T05354
Name
(GenBank) transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pamg03000
]
BKM19_008465
Transcription factors [BR:
pamg03000
]
Prokaryotic type
Helix-turn-helix
Other families
BKM19_008465
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_IclR
HTH_31
HTH_24
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AVB13632
LinkDB
All DBs
Position
complement(1608268..1609134)
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AA seq
288 aa
AA seq
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MDRVRNLLEQIQGRLDELNKAERKVAEVILLNPQMATRLSIAALAQAAKVSEPTVNRFCR
SFSVSGYPELKLQLAQSLASGAAYVSRAVEADDNPEAYTQKIFGSAIASLDSACQQLDPA
LISKSVDMLIQARQIHFFGLGASAPVALDAQHKFFRFNLAVTAHADVLMQRMIASVAHTG
ELFVIISYTGRTRELVEVARIARANGASVLGLTAAGSPLAQASTVSLNIPLPEDTDIYMP
MTSRIIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNDSRYPIEDQG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtaagaaacctcctggagcaaatccagggccgactcgatgagttgaacaag
gccgagcgcaaggtggccgaagtgatcctgctcaacccgcagatggcaacgcggctgagc
attgcagcgcttgcccaggccgccaaggtcagcgaaccgacggtcaaccgcttctgccgt
tcgttcagcgtcagcggttatccggagctcaaactgcaactggcccagagcctggcaagc
ggcgcagcctatgtcagccgcgctgtggaagccgacgacaatcccgaggcctatacccag
aagattttcggtagcgccattgcttcgctcgacagcgcatgccagcaactggacccggcg
ctgatcagcaagtccgtggacatgctgatccaggcacggcagatccactttttcgggctg
ggtgcctcggcgccggtggcgcttgatgcgcagcacaaattcttccgtttcaacctggcg
gtcacggcgcatgccgatgtgctgatgcaacggatgattgcgtcggtggcccataccggc
gaattgttcgtgatcatttcctacaccgggcgcacgcgcgagctggtggaagtggcccgc
atcgcccgtgcaaatggcgcttcggtgctgggcctgaccgccgctggctcgccactggcg
caggccagcactgtgagcctgaacattccattgccggaagacacggacatctacatgccg
atgacctcgcggatcatccagctcaccgttcttgatgtgctggccaccggcatgaccctg
cgccgcggcgttgacttccagccgcacctgcgcaagatcaaggaaagcctgaatgacagc
cgctatccgatcgaggatcagggctga
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