Pseudomonas amygdali: BKM19_009815
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Entry
BKM19_009815 CDS
T05354
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pamg03016
]
BKM19_009815
Enzymes [BR:
pamg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BKM19_009815
Transfer RNA biogenesis [BR:
pamg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BKM19_009815
Prokaryotic type
BKM19_009815
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
E3_binding
Motif
Other DBs
NCBI-ProteinID:
AVB13870
UniProt:
A0AB35R0P3
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All DBs
Position
1895461..1896519
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AA seq
352 aa
AA seq
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MNELELLGPRAYGDALGRAALKATAEDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEEAA
RRLARAAGVQLRTVSYAGLKDRQALTRQWFSIQLSGKADPDLSAAQDDTLQILKSTRHKR
KLQRGAHAANGFTLRLTQLDADTDALNQRLETIARQGIPNYFGAQRFGYQGGNLGEARDY
AARKALPEQRAVRSRLLSTARSYLFNRVLAARVADGSWEKAQVGDLLAFTDSRSFFPAGV
DECSDPRLAILDLHPTGPQWGEGPSPAGGATAELENAIANDESALRDWLVRAGMAHERRI
LRLPIGRLTWHYPESDILQLEFVLPPGCFATVLVRELIDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacttgaactgcttggccccagggcctacggcgatgcactgggtcgtgcagcc
ctcaaggcgactgccgaagactttcaggtcgacgaagtgctggacattccgctttcaggc
gatggcgagcatttatggctgtgggtcgaaaaacgcggcctgaataccgaagaggcggca
cgtcggctggcccgggccgcgggggtgcagttgcgtacggtcagctatgccggtctcaag
gaccgccaggcactgacccgccagtggttcagcattcaactgtcgggcaaggccgatcct
gatctgtcggccgcgcaggacgatacgctgcagattctcaaaagcactcgacacaagcgt
aagctgcaacgcggtgctcacgctgcgaatggctttacgttgcggcttacgcaactggat
gccgacacggacgctttgaatcagcgtcttgaaaccattgcccggcagggcatccccaat
tatttcggcgcgcagcgtttcggttatcagggtggaaatcttggcgaggcacgcgattac
gctgcccgcaaagcgctgcccgagcaacgtgcggtgcgttcgcgactgttatccacggcg
cgcagctacctgttcaatcgagtactggcagcccgcgttgccgatggcagctgggaaaag
gctcaggtaggggatttgctggctttcaccgacagccgcagcttttttccggcgggcgtt
gatgagtgcagcgatcctcggctggcgattctcgatctgcaccctaccgggccacagtgg
ggtgaaggcccttcgccagcgggtggcgcgacggcagaactggaaaatgccatcgccaat
gatgagtctgcgttgcgtgactggctggtcagagcgggcatggcgcacgaacgacgcatc
ctgcgactgcccattgggcggctgacgtggcattatcccgagtctgacattctgcaactg
gaattcgtccttccgcccggatgcttcgccaccgttttagtgcgcgaactcattgatctg
gtgccggttgggcagacggacagcccatgcgtattctga
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