Pseudomonas amygdali: BKM19_009835
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Entry
BKM19_009835 CDS
T05354
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pamg03021
]
BKM19_009835
Transcription machinery [BR:
pamg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BKM19_009835
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
KinB_sensor
Motif
Other DBs
NCBI-ProteinID:
AVB13874
UniProt:
A0AB35R2C1
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All DBs
Position
1899112..1900119
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AA seq
335 aa
AA seq
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MALGNEAPEFDIDDEVLLMEAGIVLKEASNEKQPPAASGRAKVKHSTSLKQHKYIDYTRA
LDATQLYLNEIGFSPLLSPEEEVHFARLSQSGDPAGRKRMIESNLRLVVKIARRYVNRGL
SLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKE
LNVYLRAARELTQKLDHEPSPEEIANLLEKPVGEVKRMLGLNERVSSVDVSLGPDSDKTL
LDTLTDDRPTDPCELLQDDDLSQSIDQWLSELTEKQREVVIRRFGLRGHESSTLEDVGLE
IGLTRERVRQIQVEGLKRLREILEKNGLSSESLFQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggctcttggcaacgaagcgccggagtttgacatcgatgatgaagtgctccttatggaa
gccggcattgtcctgaaggaagcgtcaaacgagaagcagccacccgctgcctccggacgc
gccaaggtcaagcattcaacatcgctcaaacaacacaagtacattgactacacgcgggcg
cttgatgctacccagctgtacctcaatgaaatcggtttttctcctctactatccccggaa
gaagaagttcattttgcgcgtctgtcgcaaagtggagacccggccgggcgcaaacgcatg
attgaaagcaatctgcgtctggtagttaaaattgccagacgttatgtcaatcgtgggctg
tcattgcttgacctgatcgaggagggcaacctggggttgattcgggcggttgaaaaattc
gaccctgaacgcggctttcgtttttccacctacgccacctggtggattcgccagaccatc
gaacgcgcgatcatgaatcagacccggaccatccggctgccgattcacgtcgtcaaggag
ttgaatgtttatctgcgcgcggcccgagagctgacccagaagctggatcatgaaccttct
cccgaagaaatcgccaatctgctggaaaaaccggtaggtgaggtcaagcgcatgctcggt
ctcaacgagcgtgtctcgtcggtggacgtctcgctggggcctgattcggacaagacgctg
ctcgacaccttgaccgacgatcgtccgaccgacccctgtgagctgctgcaggacgatgat
ctgtcccagagcatcgatcaatggttgtctgagttgaccgagaagcaacgggaggttgtc
atccgtcgctttggcttgcgcggacatgaaagcagcacacttgaagatgtagggcttgag
atcggtctgacgcgtgagcgggtcaggcagattcaggttgaagggctcaagcgcctgcgt
gagatccttgaaaaaaacggcttgtccagcgagtctctcttccagtaa
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