Pseudomonas amygdali: BKM19_009885
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Entry
BKM19_009885 CDS
T05354
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pamg
Pseudomonas amygdali
Pathway
pamg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BKM19_009885 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pamg03400
]
BKM19_009885 (mutS)
DNA repair and recombination proteins [BR:
pamg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BKM19_009885 (mutS)
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Gp41_Mu
Motif
Other DBs
NCBI-ProteinID:
AVB17375
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Position
complement(1907479..1910058)
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AA seq
859 aa
AA seq
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MNKAISDLSSHTPMMQQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARG
QSAGQSIPMCGIPYHAAEGYLAKLVKLGESVVICEQIGDPATSKGPVDRQVVRIITPGTI
SDEALLDERRDNLIAAVLGDERLFGLAVLDITSGNFSVLEIKGWENLLAELERINPVELL
IPDDWPQGLPAEKRRGARRRAPWDFERDSAHKSLCQQFSTQDLKGFGCENLTLAIGAAGC
LLSYAKETQRTALPHLRSLRHERLDDTVILDAASRRNLELDTNLSGGRDNTLQSVMDRCQ
TAMGTRLLTRWLNRPLRDLTILQARQTSITCFLERYRFENLQPQLKEIGDIERILARIGL
RNARPRDLARLRDALSALPELQQAMTDLEAPHLQQLAQTASTYPALADLLQRAIIDNPPA
VIRDGGVLKTGYDAELDDLQSLSENAGQFLIDLEAREKARTGLANLKVGYNRVHGYFIEL
PSKQAEQAPADYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKMLYEALLEDLIG
HLAPLQDTAAALAELDVLSNLAERALNLDLNCPRFVAEPCMRIEQGRHPVVEQVLSTPFV
ANDLALDDSTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRI
GSSDDLAGGRSTFMVEMSETANILHNATDKSLVLMDEVGRGTSTFDGLSLAWAAAECLAQ
LRAYTLFATHYFELTVLPESEPLVTNVHLNATEHNDRVVFLHRVLPGPASQSYGLAVAQL
AGVPGKVITRAKEHLQRLETTSLPHEQPKAKPGKPAVPQQSDMFASLPHPVLDELSKIKV
DDMTPRQALDLLYTLQTRL
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaatttccgacctgtcctcacatactccgatgatgcagcagtactggaaa
ctcaaaaaccagcacctggatcaactgatgttttatcgcatgggcgatttctacgagatc
ttctacgaagatgcgaagaaagccgccaagttgctggacatcaccctgaccgcgcgcggt
cagtcggcaggccagagcatccccatgtgcgggattccttatcacgccgccgaaggctat
ctggccaaactggttaagctgggcgaatcggtcgtgatctgtgagcagatcggcgacccg
gccaccagcaagggcccggtggatcgtcaggtggtccgcatcattacgcccggaaccatc
agcgacgaggccttgctcgatgagcgcagggataacctgattgccgccgtactgggtgac
gaacgcctgttcggccttgccgtgctggacattaccagcggcaacttcagtgtgctggag
atcaagggctgggagaatctgctggccgagcttgaacgcatcaacccggtcgagctgttg
attccggacgactggccgcaaggtctgcctgccgaaaaacgccgtggtgcgcgacgtcgt
gcgccgtgggatttcgagcgcgactcagcccataaaagtctgtgtcagcagttttcaacc
caggacctgaagggttttggttgcgaaaacctgacactcgccatcggtgctgcgggctgc
ctgctcagctacgccaaggaaacccagcgtaccgccctgccccacttgcgcagcctgcgc
cacgaacgcctcgacgatacggtaatcctcgacgcagccagtcggcgtaaccttgagctg
gacaccaacctctccggtggccgcgacaatacgctgcaatcggtcatggaccgctgccag
acggcgatgggaacgcggctgctgacccgctggctgaaccggccgttgcgcgacctgacg
attcttcaggcacgccagacgtccattacctgctttctggagcgctaccgctttgagaac
ctgcagcctcagctcaaggaaatcggcgacatcgagcggattctggcgcgtatcggcctg
cgtaatgcgcgaccacgagaccttgcgcgtctgcgcgacgccctgagcgccctgcccgaa
ctgcagcaggcgatgaccgacctggaggcgccgcatctgcagcaacttgcgcagactgcc
agcacctatccggcactcgccgatctgctgcagcgcgcgatcatcgacaatccgcctgcc
gtgatacgcgacggcggtgttctgaaaaccggctacgacgctgagctggatgatctgcaa
tcgctgagtgaaaacgccggtcagttcctgatcgatctggaagcccgcgaaaaggcccgt
accggtcttgccaacctgaaagtcggttacaaccgcgtgcacggctacttcatcgagttg
ccgagcaaacaggccgagcaggctccggctgattacatacgccgccagaccctcaagggg
gccgagcgctttatcacgcccgagctcaaggaattcgaagacaaggcgttgtcggccaaa
agccgcgcactggcacgtgaaaagatgctctacgaagcgctgcttgaagacctgatcggc
catctagcgccgctgcaggacacggcagcggcgctggctgaactggacgtgctgagcaac
cttgcggagcgcgcgctgaatctggacctcaactgcccacggttcgttgccgaaccctgc
atgcgcatcgagcagggccgtcacccggtcgtagagcaggtactgagtaccccgtttgtc
gccaacgacctggcgctggacgacagcacgcgcatgctggtcataaccggcccgaacatg
ggcggtaaatcgacctatatgcgtcagacggcactgatcgtactgctggcgcatatcggc
agtttcgtgcccgctgccagctgcgaactgtcgttggtcgaccggatcttcacccgtatc
ggctccagcgacgacctggccggcgggcgctcgacgttcatggtggaaatgagcgaaacg
gcaaacatcctgcacaacgctaccgacaaaagcctggtgctgatggacgaagtcggacgc
ggtaccagcaccttcgacggcctttctctggcttgggcagcggcggaatgtctggcgcaa
ctgcgtgcttatacactgttcgcgacgcactatttcgagctgacagtgctgccggaaagc
gaaccgctggtgaccaacgtgcacctgaatgctaccgagcataacgaccgggtcgtcttc
ctgcaccgcgtactgccaggaccagccagccagagctatggcctggccgtggcccagctt
gcgggcgttccgggcaaggtcatcacgcgcgccaaagagcatctgcagcgcctggaaacc
accagcctgccgcacgaacagcctaaagccaagcccggcaaacccgcggtcccgcagcag
agcgatatgtttgcaagcctgcctcatccggtgctcgacgaactgtccaagatcaaagtc
gacgatatgactccgcggcaggcgctggatttgctatacacattgcaaactcgcctgtga
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