Pseudomonas amygdali: BKM19_010025
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Entry
BKM19_010025 CDS
T05354
Name
(GenBank) outer membrane porin, OprD family
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg01501
beta-Lactam resistance
pamg02020
Two-component system
Module
pamg_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BKM19_010025
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BKM19_010025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pamg02000
]
BKM19_010025
01504 Antimicrobial resistance genes [BR:
pamg01504
]
BKM19_010025
Transporters [BR:
pamg02000
]
Other transporters
Pores ion channels [TC:
1
]
BKM19_010025
Antimicrobial resistance genes [BR:
pamg01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
BKM19_010025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AVB13901
UniProt:
A0AB35QYV3
LinkDB
All DBs
Position
complement(1935370..1936710)
Genome browser
AA seq
446 aa
AA seq
DB search
MRVMKWSAIALAVTAASTQLATAAPFVSDQADAKGFVEGSTLDLKLRNYYYNRDKKDRAQ
DDRDWTQGIWANFSTGYTQGTIGVGVEAFGYAGLKLWGPDKYSGSGNLATSADGADRDNK
DTFGKIGGAVKFRISKTELKVGDMQPTSPVFAVGGSRLLPQTASGLSLQSSEIAGLDLEA
GHFYSGTAQDTTSHDGTIWATYATGNGLRASNADFLGGKYAVTDSLGVAFYASRLEDIWD
QYYGNVNYVLPLGNDQSLAFDVNLYRTLDEGSAEAGSINNTTYSASAAYSFLAAHTVTVA
FQKVDGDTPFDYIGIGSKNRGGDSIFLANSVQYSDFNGPGEKSWQVRYDLNMTPYGVPGL
SFMTRYINGDDIDGTKVDSSSKYAGLYGADGKHHETNLEAKYVVQNGPAKDLSFRMRQAW
HRSNVDQPDGDVNEFRLIVDYPISIL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgatgaagtggagcgcaatcgcactggccgttacggcagccagcacccaactg
gcaacagcggcacctttcgtcagcgatcaggctgatgccaagggctttgtggaaggcagc
acgcttgacctgaagttgcgcaattactattacaaccgtgacaagaaagatcgcgctcag
gatgatcgcgactggacccagggtatttgggccaacttcagcaccggctacactcaaggc
accatcggtgtcggcgttgaggcatttggctacgctggcctcaagctttggggtccggat
aagtactcaggttccggcaaccttgcgaccagcgctgacggggctgatcgagacaacaaa
gacacatttggcaagataggcggcgctgtcaaattccgcatctccaaaaccgagctgaaa
gtcggtgacatgcaacctaccagcccggtatttgctgtaggtggttcgcgtcttctgcct
caaactgcgagcggtctgagcctgcagagcagcgaaattgcaggccttgatctggaagca
ggtcacttttactccggcacagctcaagacactacgagccatgacggtacgatctgggcg
acttatgcgacaggcaatggtctgcgcgcttcaaatgctgacttcctgggcggcaaatat
gcagttaccgacagcctcggagttgccttctacgcatccagacttgaagacatatgggat
cagtactacggtaatgtgaattacgttttgcctctgggcaatgatcagtctctggccttt
gacgtaaacctttaccgcacactcgatgaaggtagcgctgaagcaggctcgatcaataac
actacctattccgcctcagctgcctattcctttctggcagcgcacacggttactgtcgca
ttccagaaggtcgatggtgacaccccgttcgactacatcggtatcggcagcaagaaccgt
ggcggcgactcgattttcctcgccaactcggttcagtattctgacttcaacggtccgggc
gagaaatcctggcaagttcgttatgatctgaacatgactccctacggcgtgcctggccta
agcttcatgacgcgctacatcaatggtgacgacatcgacggcaccaaggtagatagttcc
agcaagtatgctggtctttatggcgccgatggcaaacaccacgaaaccaaccttgaagct
aaatatgttgtacagaatggcccggcgaaagacctgtccttccgtatgcgtcaagcttgg
caccgcagcaatgttgatcagccagatggcgacgtcaacgagttccgcctgattgtcgac
tacccgatctcgatcctgtaa
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