Pseudomonas amygdali: BKM19_010085
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Entry
BKM19_010085 CDS
T05354
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
pamg
Pseudomonas amygdali
Pathway
pamg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BKM19_010085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pamg03400
]
BKM19_010085
DNA repair and recombination proteins [BR:
pamg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BKM19_010085
RecFOR pathway proteins
BKM19_010085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
RecR_HhH
HHH
IMS_HHH
Transposase_20
HHH_8
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AVB13911
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All DBs
Position
1944170..1944778
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AA seq
202 aa
AA seq
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MIGRLRGSLAEKQPPHLVLDVNGVGYELEVPMTTLYRLPHVGETVTLHTHLVVREDAHLL
YGFYEKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSALTRIPGVGKKT
AERLLVELKDRFKAWESLPGTFTLVSNGPNQAEPVASAESDAVSALISLGYKPQEASKAV
SAIKEKDLSSADLIRRALKGMG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
gtgattggacgtttacgcggctctctcgccgaaaaacagcctccgcatctggtgttggat
gttaatggtgtcggctatgagctggaagtgccgatgacgacgctgtatcggttgccgcat
gtcggcgagacagtgacattgcacacccatctggtggtccgcgaggacgcgcatctgttg
tatggcttctatgaaaaacgcgagcgcgagctgttccgtgaattgatccgactgaacggg
gtcggccccaagctggcgctggcgttgatgtcgggcctggaggtcgatgagctggtgcgt
tgcgttcaggcgcaggacacatcggcgctgactcgtattcccggtgtaggcaagaaaacc
gccgagcgtctgctggtcgagctcaaggatcggttcaaggcctgggagtccttgccaggc
acctttacgctggtttccaatggtccgaatcaggccgagcctgtggcgtcggccgaatcc
gacgcagtcagcgcgctgatttcgctgggttacaagccgcaggaggcgagcaaggctgtc
tccgccatcaaggaaaaagatttgagcagtgcggatctgattcgccgtgcgttgaagggg
atgggttaa
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