Pseudomonas amygdali: BKM19_011080
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Entry
BKM19_011080 CDS
T05354
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg03030
DNA replication
pamg03430
Mismatch repair
pamg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKM19_011080
03430 Mismatch repair
BKM19_011080
03440 Homologous recombination
BKM19_011080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pamg03032
]
BKM19_011080
03400 DNA repair and recombination proteins [BR:
pamg03400
]
BKM19_011080
Enzymes [BR:
pamg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKM19_011080
DNA replication proteins [BR:
pamg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKM19_011080
DNA repair and recombination proteins [BR:
pamg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKM19_011080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AVB14077
UniProt:
A0AB35QTU5
LinkDB
All DBs
Position
2143287..2144066
Genome browser
AA seq
259 aa
AA seq
DB search
MALQNLDNRSIVLDTETTGMPVTDGHRIIEIGCVELIGRRLTGRHFHVYLQPDRESDEGA
IGVHGITNEFLVGKPRFAEVADEFFEFIKGAQLIIHNAAFDVGFINNEFALMGSQDRADI
TQHCSILDTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLAMTGG
QTSLSLAGNASDGNGSGEGSGNRGSEIRRLPADRKPCRIIRASESELAEHEVRMSTIAKA
SGAPALWVQMLEAAAQTSS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcattacaaaacctggataacagatcgatcgttctcgataccgaaaccaccggtatg
ccggtgacagatggtcaccggatcatcgagatcggttgtgtcgagttgattggccggcgc
ctgaccggtcggcattttcacgtgtacctgcaacctgatcgcgaaagtgacgaaggcgcg
attggtgttcacggtatcaccaacgaatttctggtcggcaagccccggtttgccgaagtc
gccgatgaatttttcgaattcatcaaaggcgcgcaactgatcattcacaacgcagcgttc
gatgttggcttcatcaacaacgaatttgccttgatgggttcgcaggacagggctgatatc
acccagcactgttcgatcctcgacaccctgatgatggcccgcgagcgccatccggggcag
cgcaacagtctggatgccctgtgcaagcgctacggcgtcgacaactcgggccgcgagctg
cacggcgcactgctcgactctgaaattctggccgacgtctacctggcgatgaccggcggg
cagaccagcctgtcgctggctggtaatgcctctgacggcaacggctccggtgaaggctct
ggcaaccgaggcagcgaaatccgccgtttgcctgccgatcgcaaaccttgccgcatcatt
cgtgcttcggaaagtgaactggccgagcatgaagtccgtatgagcaccattgccaaggca
tccggtgcacctgctttgtgggtacaaatgctggaagccgcagcgcagacgtcctcctga
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