Pseudomonas amygdali: BKM19_012350
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Entry
BKM19_012350 CDS
T05354
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16088
outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pamg02000
]
BKM19_012350
Transporters [BR:
pamg02000
]
Other transporters
Pores ion channels [TC:
1
]
BKM19_012350
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
AVB14293
UniProt:
A0AB35QVL2
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Position
complement(2448436..2450667)
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AA seq
743 aa
AA seq
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MHNPSRLTPLSKALMLSQMFRSRPSMAAMGLALCMPVASQAQETAADGSTTTGTVNLAPT
AIDSQYLGTATDGTGSYTTGAVSIGKGAPQSLRETPQSVSVVTRQVMDDNNLNSLSKVLE
DTPGITFQYRNFGGHVYTSRGFSLLAESFLVDGIGGQGYQITGWMQPDMAIYDRVEVLRG
ASGLLVGAGQPGGAVNLVRKRPTADNKFSITTRAGSWDQYRVDLDGSGKLNDSGTLRGRM
VAAYDDSGSYLDGRDSRTPLLYGIVEADLSDDTTLTMSLRRQEQVINGYSIYGLPRYSNG
QSLNLSRSTNLAQKWNRLESDMTEVFTEVAHRFNEDWTSRTSLTYSQGGFDQNIAYARGA
VNPTTLAGSNFQGTLFRKDEVDSVGLNSQLEGNFNAFGLEHQVTLGADWSKQDANTHQAT
VTRRTAVNVFDVDQSAFAKPVRPAWTTDIDTTEERAGLYANTRIHLSEPLSVVLGSRLSW
YDYKYDVKTGAANSYESKQTQEFTPFAGLIYDINDNWSWYASYADIFTPQANYVTAGGSP
LDPAIGSNYETGFKGELFDKRMNLSMALFYIKQKDVAALDVNTTQTCPTSSDGSCYLQDG
ISRSKGVDVEASGEVLPGLQVFGGYTFNMLRNNGDADVAYETPKHMLRLNTSYNLPGAWN
RLTLGTGVSADSGYEVPSNKQLGVSGKAIWDARASWKLDENWKVSLNAENLFDRKYYSTS
IATDRSNVYGEPRSYVLTLRGDF
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacccgtcacgacttaccccgctcagcaaagcgttgatgctcagtcagatgttc
cgctcccggccatccatggcggccatgggccttgcgctctgtatgccggtggccagccag
gcacaggaaaccgccgcagacggttcgaccaccacgggcacggtcaacctggccccgacc
gcgatcgactcgcagtacctgggcaccgccactgacggcactggctcttacaccaccggc
gcggtaagtatcggcaagggcgcgccacagtcgctgcgtgaaacaccgcagtctgtaagc
gtggtgactcggcaagtcatggatgacaacaacctcaacagcctgagcaaggttctggaa
gacactccggggatcaccttccagtaccgtaacttcggcggtcacgtgtatacctcgcgc
ggcttctcgctgctggcggagagctttctggtcgacggcattggcggccagggctatcag
atcaccggctggatgcagccggacatggccatctatgaccgtgtggaagtattgcgcggc
gcgtctggcctgctggtaggtgccggtcagcccggtggcgcggtcaatctggtgcgcaaa
cgcccgaccgccgacaacaaattttcgatcaccactcgcgcaggttcgtgggatcagtac
cgcgtcgatctggatggcagcggcaagctcaacgattcgggtacgctgcgcgggcgcatg
gtcgcggcttacgatgacagtggttcgtacctggatgggcgcgacagccgcaccccgctg
ctgtacggcatcgtcgaagccgacctgagcgatgacaccacgctgaccatgagcctgcgt
cgccaggaacaggtcatcaatggctactcgatctacggcctgccgcgctacagcaacggc
cagtcgctgaacctgtcgcgctcgaccaatctggcgcagaagtggaaccgtcttgaaagc
gacatgaccgaggtctttaccgaagtcgcgcatcgcttcaatgaggactggaccagccgc
acgtcgcttacttactcgcagggcggttttgatcagaacattgcctacgcacgaggcgca
gtaaacccaacgacgctggcgggctccaattttcagggcacactgtttcgcaaggacgag
gtcgacagcgtcggtctgaacagtcaacttgaaggtaacttcaacgcgttcggccttgag
catcaggtaaccctgggggctgactggtcaaagcaggacgccaacacgcatcaggcgacc
gtgacgagacgcaccgcagtcaacgtctttgatgtcgaccagagcgctttcgccaaaccg
gtccgtccggcctggaccaccgacatcgacaccaccgaagaacgcgcaggcctgtacgcc
aacacgcgtattcacctgagcgagccgttgagcgtggttctgggcagccgcctgagctgg
tatgactacaagtacgacgtcaaaaccggcgcagccaacagttacgaatccaagcagact
caggaattcaccccgttcgccggcctgatctacgacatcaacgacaactggtcgtggtac
gccagctatgccgacatcttcacgccacaagccaactacgtaaccgcaggcggctcgccg
ctggacccggccatcggttccaactacgaaactggcttcaagggtgaactgttcgacaag
cgcatgaacctgtcgatggcgctgttctacatcaaacagaaagatgtcgccgcgctggac
gtgaacactactcagacctgcccgaccagctccgacggctcctgctacctgcaggacggc
atcagccgcagcaagggtgtcgacgtcgaagccagcggtgaagtgttgccaggcctgcaa
gtattcggcggctataccttcaacatgctgcgtaacaatggcgatgcagatgtagcctac
gaaacaccgaaacacatgctgcgcctcaacaccagctacaacctgccgggcgcatggaac
cgcctgaccctgggcaccggcgtgtcggcagattcgggctatgaagtgccgtccaacaaa
cagctgggcgtttctggcaaggccatctgggatgcgcgagcctcttggaaactggacgag
aactggaaggtgtcgctcaacgccgaaaacctcttcgaccgcaagtactacagcacctcg
atcgccaccgaccgctccaacgtctacggcgaaccgcgcagctatgtcctgaccttgcgg
ggggatttctga
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