Pseudomonas amygdali: BKM19_012650
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Entry
BKM19_012650 CDS
T05354
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00020
Citrate cycle (TCA cycle)
pamg00190
Oxidative phosphorylation
pamg00650
Butanoate metabolism
pamg00720
Other carbon fixation pathways
pamg01100
Metabolic pathways
pamg01110
Biosynthesis of secondary metabolites
pamg01120
Microbial metabolism in diverse environments
pamg01200
Carbon metabolism
Module
pamg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pamg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pamg_M00149
Succinate dehydrogenase, prokaryotes
pamg_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BKM19_012650
00650 Butanoate metabolism
BKM19_012650
09102 Energy metabolism
00190 Oxidative phosphorylation
BKM19_012650
00720 Other carbon fixation pathways
BKM19_012650
Enzymes [BR:
pamg01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
BKM19_012650
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
DAO
GIDA
FAD_binding_3
Thi4
Pyr_redox_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AVB14345
LinkDB
All DBs
Position
2510152..2511924
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AA seq
590 aa
AA seq
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MANINSLSFDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTEQGRIYQRP
FGGQSKDFGKGGQAARTCAAADRTGHALLHTLYQANLKAGTVFLNEYYGVDLVKNQDGAF
VGIIAICIETGETSYIRANATVLATGGAGRIYSSTTNALINTGDGIGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPDGDHVMLKLDHLGEEVLHSRLPGIMELSKTFAHVDPATAPIPVVPTCHYMMG
GVATNIHGQAITQDAAGVDQIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGIH
LEKALSEGIDYARASESDIDAALARVAGLNERTTGEDVATLRKELQSCMQNYFGVFRTGE
YMQKGIAQLADLRVRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRG
AHAREDFEDRDDENWLCHTLYFPGDKRVTKRAVNFSPKTVPTFEPKIRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaacataaattcgctttccttcgacgccatcatcattggtggtggcggtgccggt
atgcgcgctgccctgcagctcgctcagggcggtcacaagactgccgtggtcaccaaggtg
tttccgacacgctcgcacaccgtttctgcccagggtggcatcacctgcgcaattgcctct
gccgatccgaacgatgactggcgctggcacatgtacgataccgtcaagggttccgactac
atcggtgaccaggacgctatcgaatacatgtgttccgtaggccctgaagctgttttcgaa
ctcgagcacatgggcttgccgttctcccgtaccgaacagggtcgcatctaccagcgtccg
tttggcggtcagtccaaggacttcggcaagggcggtcaggctgcacgtacctgtgctgct
gccgaccgtaccggtcacgcactgctgcacaccctgtatcaggccaacctcaaggctggc
accgtattcctcaacgaatactacggcgtggatctggtcaagaatcaggacggtgccttt
gtcggcatcatcgccatctgcattgaaaccggcgaaacttcctacatccgtgccaacgct
accgtgctggcaaccggcggtgcaggtcgtatctactcttcgaccaccaacgccctgatc
aataccggtgacggtatcggtatggcactgcgcgccggtgtcccggttcaggacatcgaa
atgtggcagtttcacccgaccggcattgccggtgcaggtgtactggtcaccgaaggctgc
cgcggtgaaggcggttacctgatcaacaagcacggcgagcgtttcatggagcgttatgct
ccgaacgccaaggaccttgcaggtcgtgacgtggttgcgcgctccatggtcaaggaaatc
attgccggtaacggctgtggtccggatggcgaccatgtgatgctcaagctcgatcacctg
ggcgaagaagtgttgcacagccgtttgccaggcattatggagttgtccaagaccttcgct
cacgtcgaccctgcaacagcgccgattccggtagttcctacctgccattacatgatgggc
ggcgttgccaccaacattcatggtcaggcgatcactcaggacgccgccggtgtcgatcag
atcattccgggtctgttcgcggtaggtgaagtggcttgcgtatcggttcacggtgccaac
cgcctgggcggcaactcgttgctcgatctggtggtgttcggtcgcgctgcgggtatccac
ctggagaaagcgctgagcgaaggtatcgactacgcccgtgcttccgagtccgacatcgat
gctgcgctggcacgcgttgccggcctgaacgagcgcactaccggcgaagacgtcgccacg
ctgcgtaaagagctgcaaagctgcatgcagaactacttcggtgtgttccgcaccggcgaa
tacatgcagaagggtattgctcagttggctgacctgcgcgtgcgtatcgccaacgtcaag
atcaatgacaagagccaggcattcaataccgcccgtatcgaagcgcttgaactgcaaaac
ctgctggaagttgccgaagccacggcgatcgccgcagagcatcgtaaagagtcccgcggc
gctcacgcccgtgaagactttgaagatcgcgatgacgagaactggttgtgccacaccctg
tatttcccgggtgacaagcgcgtgaccaagcgtgccgtgaacttctcgccgaagactgtt
ccgacttttgaacctaagattcggacttattaa
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