Pseudomonas amygdali: BKM19_012655
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Entry
BKM19_012655 CDS
T05354
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00020
Citrate cycle (TCA cycle)
pamg00190
Oxidative phosphorylation
pamg00650
Butanoate metabolism
pamg00720
Other carbon fixation pathways
pamg01100
Metabolic pathways
pamg01110
Biosynthesis of secondary metabolites
pamg01120
Microbial metabolism in diverse environments
pamg01200
Carbon metabolism
Module
pamg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pamg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pamg_M00149
Succinate dehydrogenase, prokaryotes
pamg_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BKM19_012655 (sdhB)
00650 Butanoate metabolism
BKM19_012655 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
BKM19_012655 (sdhB)
00720 Other carbon fixation pathways
BKM19_012655 (sdhB)
Enzymes [BR:
pamg01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
BKM19_012655 (sdhB)
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Gene cluster
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Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_10
Fer4_9
Fer4_7
Fer4_18
Fer4_2
Fer4
Motif
Other DBs
NCBI-ProteinID:
AVB14346
UniProt:
A0AB35R2E5
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All DBs
Position
2511937..2512641
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AA seq
234 aa
AA seq
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MLQVSVYRYNPEQDAAPFMQEFQVDTGGKDLMVLDVLALVKEQDQGFSYRRSCREGVCGS
DGMNINGKNGLACITPLSAVVAKNRLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQN
DTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLAD
SRDTRTNERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQSGV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaagtcagtgtttatcgttacaaccctgagcaggacgccgcgccgttcatgcag
gagtttcaggtcgataccggtggcaaggacctgatggtgctggacgtgctcgccctggtc
aaagaacaggatcaaggcttctcttaccgtcgttcgtgccgcgaaggtgtgtgcggttcc
gatggcatgaacatcaatggcaagaacggtctggcctgcatcacgccgctgtctgccgtt
gtcgccaagaacaggctgatcgtacgtccgctgcctggtttgccggtcattcgtgacctg
gtcgtcgatatgagcatcttctacaagcagtacgagaaggtgaagccgttcctgcagaat
gacacgccggctccggccatcgaacgtctgcaaactccggaagagcgcgaaaagctcgat
ggtctgtacgagtgcattctgtgcgcttgctgctcgacttcctgcccgtccttctggtgg
aatcccgacaagttcctgggtcctgctgcgctgctgcaagcctaccgtttcctggctgac
agccgtgacacccgcaccaatgaacgtctggcttcgcttgatgatccgttcagcgtgttc
cgctgccgcggcatcatgaactgcgtcaacgtgtgcccgaaaggccttaacccaaccaag
gctatcggtcacgtgcgcaacatgttgttgcaaagcggcgtctga
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