Pseudomonas amygdali: BKM19_012675
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Entry
BKM19_012675 CDS
T05354
Name
(GenBank) succinyl-CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00020
Citrate cycle (TCA cycle)
pamg00640
Propanoate metabolism
pamg00660
C5-Branched dibasic acid metabolism
pamg00720
Other carbon fixation pathways
pamg01100
Metabolic pathways
pamg01110
Biosynthesis of secondary metabolites
pamg01120
Microbial metabolism in diverse environments
pamg01200
Carbon metabolism
Module
pamg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pamg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BKM19_012675
00640 Propanoate metabolism
BKM19_012675
00660 C5-Branched dibasic acid metabolism
BKM19_012675
09102 Energy metabolism
00720 Other carbon fixation pathways
BKM19_012675
Enzymes [BR:
pamg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
BKM19_012675
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GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
ATP-grasp
OKR_DC_1_N
Ligase_CoA_2
Motif
Other DBs
NCBI-ProteinID:
AVB14350
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Position
2518818..2519984
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AA seq
388 aa
AA seq
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MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKAGGV
KLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYLGAVVDRSSRR
IVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRDLAFQLGLEGKQVTQFAKI
FTGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLKGFHDPSQDDP
REAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTE
AFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLEGNNAELGAKV
LAESGLNIIAATSLTDAAQQVVKAAEGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcacgagtatcagggtaagcagctgttcgctgagtacggcctgccagtatcc
aagggttacgcggtagacaccccggaagcagcagcagaagcctgcgacaagatcggcgga
accgagtgggtcgtcaaagcccaggttcacgcaggtggtcgcggtaaagcgggcggcgta
aagctggttcgcagcaaggaagacgctgcagcgttcgctcaacagtggttgggcaagcgc
ctggtgacttaccagactgacgccaacggtcagccggtgaccaagatcctggtcgaatcg
tgcaccgacatcgccaaagagctgtatctgggcgctgtggtcgatcgttccagccgtcgt
atcgtgttcatggcttccaccgaaggtggcgtggacatcgagaagatcgctcacgacact
cctgaaaagattctcaaggccacgatcgacccactggtcggcgctcagccgttccagggc
cgcgatctggcattccagctgggtctggaaggcaagcaggtcactcagttcgccaagatc
ttcaccggtctggccaagctgttccaggaccatgacctggccctgctggaagtgaacccg
ctggtgatcaaggctgacggcgatctgcactgcctggacgcgaagatcaacatcgacgcc
aacgccatgtaccgtcagcccaagctgaagggcttccacgatccttcgcaggacgaccct
cgcgaagctcacgccgccaagttcgaactgaactacgtagcgctggaaggcaacataggc
tgcatggtcaacggtgctggcttggccatgggtaccatggacatcgtcaacctgcatggc
ggcaagcctgcaaacttccttgacgttggcggtggtgccaccaaggaacgcgttaccgaa
gcgttcaagatcatcctgtccgacaccaacgtcgccgcagtactggtcaacatcttcggc
ggcatcgttcgttgcgacatgattgccgaaggcatcatcggtgcagtgaaagaagtcggc
gtgaaaatcccggttgttgttcgccttgaaggtaacaacgctgaactgggcgctaaagta
ctggcagaaagcggtttgaacatcatcgctgcgaccagcctgaccgacgctgctcaacaa
gttgtcaaagccgcggagggcaagtaa
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