Pseudomonas amygdali: BKM19_013340
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Entry
BKM19_013340 CDS
T05354
Symbol
pcaQ
Name
(GenBank) pca operon transcription factor PcaQ
KO
K02623
LysR family transcriptional regulator, pca operon transcriptional activator
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pamg03000
]
BKM19_013340 (pcaQ)
Transcription factors [BR:
pamg03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BKM19_013340 (pcaQ)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Ogr_Delta
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AVB14467
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Position
2672959..2673888
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AA seq
309 aa
AA seq
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MNIDTRIKFRHLVCFLEVARQGSLARASDVLAISQPALSKSLKELETLLATTLFVRSKSG
AALTEAGVAFMRFAGPSVQALREGVSSLRSGEHETVTARLGVLSTAESLLVPEVVHRLHE
RHPALIVSVMTGPSAYLLSQLRVGELDLVVGRMTDSPQIQGLTFEHLYNESMTLVVRNDH
PLLTAPLKPESLEQFPLVLPLAGTTIRKFADSLFVQCGIRMPRQRLETLSLTLSRRYVQC
SDAVWIAPLDAVSLELKGGTLVELDMGIREPGGSVGLCSNPALPLTRAAQWCVDELRGVG
ETYRKAQYA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgaatattgatacccgcatcaaatttcgccatctggtgtgctttctcgaggtggctcgg
cagggcagcctggcgcgtgcctccgatgtactggcaatcagtcagcccgcgctgtcgaaa
agtctcaaggagctggaaacactgctggccaccaccttgtttgtgcgcagcaagagcggt
gcggcgctgaccgaggcgggggtggcattcatgcgtttcgccgggccgagcgtccaggcc
ttgcgtgaaggtgtcagtagcctgcgctcgggtgaacatgaaactgttaccgcacggttg
ggcgtgctgtccacggctgaaagcctgttggttccggaggtggtccatcgtctgcacgag
cgccaccccgcgttgatcgtcagtgtgatgaccggccccagcgcgtatctgctgtcgcaa
ttgagggtaggggagctggatctggtggtcgggcgcatgactgacagcccgcagattcag
gggctgacgttcgagcatctgtacaacgagtcgatgacgctggtggtgcgcaacgatcac
ccgttactgacggcaccgctcaagcctgaaagtctggagcagttcccgctggtgttgccg
ctggcgggcaccaccatccgcaagtttgccgacagtcttttcgtacaatgcggtatccgc
atgccgcgtcagcgccttgaaaccctgtcactcaccctgagccgccgctatgtgcagtgc
agcgatgcggtgtggatcgcgccactggatgcggtgtcgctggagttgaaaggcggcacg
ctggtggagctggacatgggtattcgcgagccgggcggatcggtcggcctgtgcagcaac
ccggccctgccgctgacacgcgcggcgcaatggtgtgtggatgagctgcgaggcgtcgga
gagacctaccgcaaagcgcagtatgcataa
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