Pseudomonas amygdali: BKM19_013575
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Entry
BKM19_013575 CDS
T05354
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BKM19_013575
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pamg01007
]
BKM19_013575
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pamg03016
]
BKM19_013575
Enzymes [BR:
pamg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
BKM19_013575
Amino acid related enzymes [BR:
pamg01007
]
Aminoacyl-tRNA synthetase
Class II (U)
BKM19_013575
Transfer RNA biogenesis [BR:
pamg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BKM19_013575
Prokaryotic type
BKM19_013575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
AVB14513
UniProt:
A0AB35R2N6
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All DBs
Position
2714367..2716745
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AA seq
792 aa
AA seq
DB search
MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFSGVVVGEVLSTEQHPDAD
KLRVCQVSNGSETFQVVCGAPNVRPGLKIPFAMIGAELPGDFKIKKAKLRGVESNGMLCS
AAELQAGEGNDGLMELAADAPVGEDIRVYLNLDDASIEVDLTPNRGDCLSVAGLAREVGA
LYATDVTRPQIAAVSAVHDEVRPVEVLAPAACPRYLGRVIRNVDLSRPTPLWMVERLRRS
DVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQEVSLRADT
LVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSYGLHTDASHRYE
RGVDWQLAREAMERATGLLLEITGGEAGPITEVVSEQHLPSIAPVTLRASRVEQMLGLVI
ENAEIERLLTGLGLAVAAEADGQWRVEVPSHRFDISLEVDLIEELARLYGYNRLPVRYPQ
ARLAPQAKAEAKGDLPELRRLLVARGYQEAITYSFIDPKWFELFSPGAKPLLLANPISND
MAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDGLKQEPMLAGVVCGSRLPE
GWAQGRDAVDFFDVKADVEAVLGFAGALGEFTFTPGQHPALHPGQTARIERDGREVGFLG
AIHPELSKTLGLDRPVFVFELVLAEVSTGRLPKFHELSRFPEVRRDLALLADRDVSASAV
LDVIRENAGEWLTDLRLFDVYQGKGIDPHRKSLAVGLTWQHPSRTLNDDEVNATTLAILT
SLEERLNATLRK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgaacaatggctgcgtggctgggtaagcccgcaggtttcccgcgacgag
ctggttgctcgtctgtcgatggccggtcttgaggttgacagcgtcacgctggccgccggc
gttttcagtggagtggtcgtgggtgaggtgctgagcaccgaacagcaccccgatgccgac
aagctgcgcgtgtgccaggtcagcaatggcagcgaaacctttcaggttgtgtgtggcgcg
ccaaacgtgcgccccggcttgaaaattccgttcgccatgatcggtgccgagctgccgggc
gatttcaagatcaagaaagccaagctgcgtggcgtcgagtccaacggcatgctgtgttcg
gctgccgagttgcaggctggcgagggcaatgatggcctgatggagctggccgccgatgcg
ccggtcggtgaggacattcgcgtctacctgaacctggacgacgccagcatcgaggtcgac
ctgaccccgaaccgtggcgactgcctgtcggtggccggtctggcgcgtgaagtcggtgcg
ctgtacgccactgacgtcacccgtccgcagatcgctgctgtcagcgctgtgcacgatgaa
gtgcgccctgtcgaagtattggctccggctgcatgcccgcgttacctgggccgcgtcatc
cgcaacgttgatctgtcgcgtccgactccgttgtggatggtcgagcgtctgcgtcgttcc
gacgtgcgcagcatcgatgccgctgtcgatatcaccaactatgtgatgctcgagctgggt
cagcctctgcatgctttcgatctggccgaaatcaacggcggcattcgtgtgcgcatggcg
gaggagggcgagaagctcgttctgctcgacggtcaggaagtcagcctgcgtgccgacacc
ctggtcattgccgaccaccagcgtgctctggcaattgccggtgtcatgggtggcgagcac
agcggcgtaactgccggtactcgtgacatcttcctggaaagtgctttcttcgacaccatc
tcggtggctggcaaggcgcgttcctacggtctgcacaccgatgcctcgcaccgttacgag
cgtggtgttgactggcaactggcccgtgaagccatggagcgtgcgactggcctgctgctg
gaaatcaccggtggtgaggctggtccgataacagaagtggtcagcgaacagcatttgcca
tcgattgctccggttacgttgcgcgccagtcgcgtcgagcagatgctcggtctggtcatt
gaaaacgccgaaatcgagcgtctgctgacaggtctgggccttgctgtggctgccgaagcc
gacggccagtggcgtgtagaagtgccaagtcatcgcttcgacatcagccttgaggtcgat
ctgatcgaagaactggcacgtctgtacggctacaaccgtctgccggtccgttatccgcaa
gctcgtctcgctcctcaggcgaaggccgaagccaagggcgatctacctgagctgcgccgc
ctgctggttgcccgcggttatcaggaagcgatcacctacagcttcatcgacccgaaatgg
ttcgaactgttctcgccgggcgccaagccactgttgctggccaacccgatttccaatgac
atggccgccatgcgcgcctcgttgtggccgggtctggtgaaagcgctgcaacacaacctc
aaccgccagcaggaccgcgtacgcatgttcgaaagcggcctgcgtttcgtcggtcagctt
gacggcttgaagcaagagccgatgctggcgggtgtggtatgcggcagccgtctgccggaa
ggttgggcgcaaggccgtgatgcggtcgacttcttcgacgtcaaggctgacgtcgaagcg
gttctgggttttgccggtgcgctgggtgagttcaccttcacaccgggccagcatcccgcc
ttgcacccaggccagacagctcgcatcgagcgtgatggtcgcgaagtcggcttcctcggc
gccattcacccggaactgtcgaaaaccctgggcctggatcgtccggtatttgttttcgag
ctggttctggctgaagtatcgacaggccgtctgccgaaattccacgagctttcgcgtttc
ccggaagtgcgtcgcgacctggccttgctggctgatcgcgacgtttcggccagtgcggtt
ctggacgttattcgtgaaaatgcaggcgagtggctcacagacctcaggttatttgatgtt
taccagggtaaaggcattgatccacatagaaaaagccttgcagtcggcttgacctggcag
catccatcgcgcactcttaatgacgatgaggtaaacgcaacgacacttgctatcctcacc
tcgcttgaggagaggttaaacgccacgttaaggaagtag
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