Pseudomonas amygdali: BKM19_014260
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Entry
BKM19_014260 CDS
T05354
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18295
membrane fusion protein, multidrug efflux system
Organism
pamg
Pseudomonas amygdali
Module
pamg_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pamg02000
]
BKM19_014260
01504 Antimicrobial resistance genes [BR:
pamg01504
]
BKM19_014260
Transporters [BR:
pamg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BKM19_014260
Antimicrobial resistance genes [BR:
pamg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
BKM19_014260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
CALCOCO1
Motif
Other DBs
NCBI-ProteinID:
AVB14624
UniProt:
A0AB35R140
LinkDB
All DBs
Position
complement(2861732..2862892)
Genome browser
AA seq
386 aa
AA seq
DB search
MSGLSDWRVMPAVALLAVLGLAGCEQKQQQDHAASTAPKEVEAIEVKAESFTVVDELPGR
IEPVRVAQVRARVSGIVLTRNFEEGADVKAGAVLFQIDPAPFKAALSKAQGDLARTEATL
FETQATVKRYESLVEIEAVSRQTFDTARSALQNAIAAKKSAQADVETARLNLGYATVKAP
ISGRIGRAMVTEGALVGQGETTLLATIQQLDPVYADFTQPVADALQMRAAIQEGRLPKGG
EDALSLSVDGTDYQSTGTLLFTDVAVDRTTGQVSLRARFANPKGVLLPGMYVRVRTPQRV
DANAILVPQRAVQRSSDGAARVMVIAQDGTVEVRPVKTGAMQDSRWQITEGLKAGEQVVV
GNMTGLNSGDKVVAKSPSAQPQSKSQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtttgagcgattggcgtgtcatgcctgcggtagcgctgctggcagtgttgggt
ctggccgggtgcgagcagaaacagcagcaggatcacgctgcatcgacagcacccaaagag
gtggaagccatcgaggtcaaagccgaatcgttcacggtcgttgatgaactgcccggccgt
atcgaaccggttcgtgtggcgcaggtacgcgcccgggtgtccggtatcgtgctcacgcgc
aatttcgaggaaggcgccgatgtgaaagcgggcgcggtgctgttccagatcgacccggca
ccgttcaaggccgcgctgtccaaggctcagggcgacctggcccgtacagaggccacgctg
ttcgaaactcaggctacggtcaaacgttacgagtcgctggtcgaaatcgaagcggtcagc
cgtcagaccttcgacaccgcccgctctgcgctgcaaaacgccatcgccgctaaaaagtcg
gctcaggcagatgtcgaaaccgctaggctgaacctgggctatgccacggtcaaggcgcct
atttcaggacgcatcggccgcgcgatggtcactgaaggcgcgctggtcggtcagggcgaa
accaccctgctggcaaccattcagcaactcgacccagtctacgccgacttcacccagccg
gtcgccgacgccttgcaaatgcgcgcggccattcaggaaggtcgcctgcccaagggtggc
gaagacgcgctgtcgctgagcgtcgacggtactgactatcaaagcactggcaccctgttg
tttaccgacgttgcagtagaccggaccaccggccaggtgtcgttacgcgcccgcttcgcc
aaccccaaaggcgtgttgctgccgggcatgtatgtgcgggtgcgcacacctcagcgggtc
gatgccaatgccatcctcgtcccgcaacgtgccgttcagcgctccagtgatggcgcagcc
cgcgtaatggtgattgcccaggacggtacggtcgaagtccgcccggtcaaaaccggcgca
atgcaggattcgcgctggcagatcaccgaggggctgaaggcaggtgaacaggttgtcgtc
ggcaacatgaccgggctcaattccggtgacaaggtcgtcgccaaatcgccctccgcccag
ccgcaatccaagtcgcaataa
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