Pseudomonas amygdali: BKM19_014450
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Entry
BKM19_014450 CDS
T05354
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00550
Peptidoglycan biosynthesis
pamg01100
Metabolic pathways
pamg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BKM19_014450 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BKM19_014450 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pamg01011
]
BKM19_014450 (mrdA)
Enzymes [BR:
pamg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BKM19_014450 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pamg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
BKM19_014450 (mrdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
MAP
Motif
Other DBs
NCBI-ProteinID:
AVB14656
UniProt:
A0A2G4DGZ3
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All DBs
Position
2901246..2903135
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AA seq
629 aa
AA seq
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MPNPIPLKDHEKETRLVNQRLIACAVLVGLLAACLVARMYFLQVTEFDYHSTISENNRVH
VLPIPPERGLIFDRNGEVLADNRPSFNLTLTRERAGDWHKVIDELMTLLELPDEDRILFD
KELKQVRHPFEPATLLYELTEEQIATLAVNQYLLPGVDVAAQFVRHYPLGAHFAHSIGYV
GRINEKEASHLDNEYRGTQSIGKTGIERFYESELHGHVGYEEVETNAQGRVLRVLKHTDP
VPGKNITLTLDAHLQAAAENALGDRRGSVVALDPETGEVLAMVSKPSFDPNLFVTGISFK
QYAALRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVVTASTKVFDPGYFQLPDFD
HKYRNWNHSGDGWVDMDTAIMRSNDTYFYTVAHKLGIDRLHDYMTMFGIGQKVSLDMFEE
SAGLMPSREWKRATRRQAWFPGETVILGIGQGYMQVTPLQLAQATSLIASKGVWHRPHLA
MEVGHDVPLDEHPMPNIVLRDPNEWNQVNTGMQMVMHDPRGIARDAAKGAQYRIAGKSGT
AQVVAIKQGERYNRLKTLERNRDNALFVGFAPADHPKIVVSVTIENGEAGGRVAGPVVRE
ILDAWLLDSEGKLKPQYAVPAKAPGNPHA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatccaattcccctgaaagaccacgaaaaagagacgcggctggtcaatcagcgc
ctgattgcctgcgcggtgctggtcggcctgctggctgcctgtctggtcgcgcgcatgtat
ttcctgcaagtcaccgagttcgactatcactcgaccatttccgaaaacaaccgtgttcac
gtgctgccgatcccgcccgagcgcggtttgatctttgaccgcaatggcgaagtgctcgct
gacaatcgccccagtttcaacctgaccctgacccgtgagcgcgccggtgactggcacaag
gtgatcgatgaactgatgaccctgctggagttgcccgacgaagaccggattctgttcgac
aaggaactgaaacaggttcgccatccgttcgagcccgcaacactgctgtatgagctgacc
gaggagcagatcgccacactggcggtcaatcagtacctgctaccgggcgtggatgtggca
gcgcagttcgttcgtcactacccgttgggcgcacattttgcccattcgattggctatgtc
ggacgtatcaacgaaaaagaagcgtcgcatctcgacaacgaatatcgcggcactcaatcc
atcggcaagaccggtatcgagcgcttctacgaatccgagctgcacggccacgtaggctac
gaagaggtcgaaaccaacgcccaaggccgcgtgctgcgggtgctgaaacatactgacccg
gtgccgggcaagaacatcaccctcacgctggacgcgcatttgcaggccgcagcggaaaac
gctctgggtgatcgacgtggttcggtggttgcgctggacccggaaaccggcgaagtgctg
gcgatggtcagcaaaccaagcttcgaccccaacctgttcgtcaccggcatcagcttcaag
cagtacgctgcgctgcgcgattccattgaccggccgctgttcaaccgggtgctgcgtggc
ctttacgcaccgggctcgacggtcaagccggaggtggcgattgccggtctcgacagcggt
gtggtcacagcctcgaccaaggtcttcgaccccggttatttccagctgccggacttcgac
cacaaataccgtaactggaaccacagcggcgatggctgggtggatatggacacagcgatc
atgcgttccaatgacacctacttttacactgtcgcgcacaagctcggcatcgaccgcctg
cacgactacatgaccatgttcggcatcggtcagaaggtctcgctggacatgttcgaggaa
tcggccgggctgatgccgtcccgcgaatggaagcgcgctacacgccgccaggcgtggttc
ccgggcgaaacggtgattctcggcattggccagggctacatgcaggtcacgccattgcaa
ctggctcaggcaacgtcactgattgccagcaaaggcgtctggcatcgaccgcacctggcg
atggaagtaggccacgacgtgccgcttgatgagcacccgatgccaaacatcgtgctgcgc
gatcccaacgaatggaatcaggtcaacaccggcatgcagatggtcatgcacgatccgcgc
ggcattgcgcgcgatgccgccaagggcgcgcagtaccgcatcgctggcaaaagcggtacg
gcgcaggtggtggcgatcaagcagggtgagcgttacaaccgtctgaagacgctggagcgt
aaccgtgacaacgccttgttcgtcggcttcgcgccagccgatcatccgaagatcgtggtg
tcggtgaccatcgagaacggcgaagcgggcggtcgagtcgcgggccctgtggtccgggaa
attctcgatgcctggctgctcgacagcgagggcaagctcaaaccgcaatacgcagtccct
gccaaggcgccgggcaacccgcacgcctga
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