Pseudomonas amygdali: BKM19_014520
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Entry
BKM19_014520 CDS
T05354
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pamg
Pseudomonas amygdali
Pathway
pamg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BKM19_014520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pamg02000
]
BKM19_014520
Transporters [BR:
pamg02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BKM19_014520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
DUF1846
DUF4148
Phi29_Phage_SSB
Motif
Other DBs
NCBI-ProteinID:
AVB14668
UniProt:
A0AB35R6Z2
LinkDB
All DBs
Position
complement(2917808..2918860)
Genome browser
AA seq
350 aa
AA seq
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MKSTKRLALTGLSCLPLAAALVSLPAQAETTLYLGMNGGTMERLYADQVLPAFEKANNVK
VVIVPGTSADILAKVQASKDNPQMHVIFLDDGIMYRAISMGLCDALQPSASLADLPAKAK
IKEQAAAVSLGVTGLAYNTRMFKEKGWSAPTSWMDLADKRFKDKVVFQSLASSTFGLHGF
LMFNRIQGGSEKDVEPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAALFPLTPTQVIA
LKIKGVPVEYASPKEGGVVLNVAECAIANNNQPELAQKLAAYLLTPEAQAPALEFGDQIP
SNPKTPTSEKTRAQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaccaaacgtctcgccctcaccggcctgtcatgcctgcccttggctgccgca
ctcgtgtcgttgcctgcccaggccgaaaccacgctgtacctgggcatgaacggcggaacc
atggagcgcctgtatgccgatcaggtgctgcccgctttcgagaaggccaacaacgtcaag
gtggtgatcgtgcccggcacctcggccgatatccttgccaaggtgcaggcgagtaaagac
aacccgcagatgcacgtcatctttctcgacgacggcatcatgtaccgggctatttccatg
ggcctgtgtgacgccctgcagcccagcgccagtctggctgacctgcctgccaaggccaaa
atcaaggaacaggcagcggctgtcagcctgggtgtaaccggccttgcttacaacacgcgg
atgttcaaggaaaagggctggagcgcgcccacctcgtggatggacctggccgacaaacgt
ttcaaggacaaggtggtgttccagtcactggcctcctcgaccttcggcctgcatggcttt
ctgatgttcaaccgtatccagggcggcagcgagaaagacgtcgaacccggcttcaaggcc
tggccgaaaactgtcggcccgaacgtgctggaatacatagccagctcggcaaagatctcg
gaaatggtgcaaaccgatgaagccgcgctgttcccgctgacgcctacgcaggtgatcgcc
ttgaagatcaagggcgtgccggtggagtacgcctcgcccaaggagggcggcgtagtgttg
aacgtggctgaatgtgcaatcgccaataacaaccagccagagctggcccagaagctggcg
gcctacctgctgacaccggaagcacaggcacctgcgctggaattcggcgatcagatcccg
tcaaatccgaaaaccccgacctccgagaagacgcgcgcgcaggtcgaggccatggagaaa
tacctggaaacagcggtaaccatcgactgggatcaagtcaaccagatccgccccgagtgg
aacgcacgctggagccgcagtatcgagcgctag
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