Pseudomonas amygdali: BKM19_015380
Help
Entry
BKM19_015380 CDS
T05354
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00280
Valine, leucine and isoleucine degradation
pamg00650
Butanoate metabolism
pamg00907
Pinene, camphor and geraniol degradation
pamg01100
Metabolic pathways
pamg01120
Microbial metabolism in diverse environments
pamg04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BKM19_015380
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
BKM19_015380
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
BKM19_015380
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BKM19_015380
Enzymes [BR:
pamg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
BKM19_015380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
DUF732
Motif
Other DBs
NCBI-ProteinID:
AVB14811
UniProt:
A0AB35R6L1
LinkDB
All DBs
Position
complement(3099472..3100371)
Genome browser
AA seq
299 aa
AA seq
DB search
MSLPQKVNIVEVGPRDGLQNEAQPISIDDKVRLVDDLTAAGLSHIEVGSFVSAKWVPQMA
GSAQVFENIQRREGVIYSALAPNLRGFEDALAAGVREVAVFAAATEGFSRRNLNCSISES
LERFAPIMAAAQMHGVQIRGYVSCVLGCPYEGSVSPQQVAAVANELYAMGCYEVSLGDTI
GTGTPGATRALFNAVSAQIPRGKLAGHFHDTYGQALVNIYASLEEGIQVFDSSVAGLGGC
PYAKGASGNVATEDVQYMLQGMGIETGVDLDKVIAAGQRICGVLQRSNGSRVARARLSA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttccacaaaaggtaaatatcgttgaagtcggcccgcgtgacggcctgcagaat
gaagcacaaccgatcagtatcgacgacaaggtgcgcttggtggatgacctgacggcagcc
ggactgagccacattgaagtcggcagttttgtctcggccaaatgggtgccgcagatggct
ggctccgcccaggtgttcgaaaatatccagcggcgtgaaggcgttatctactctgccctg
gcacccaacctgcgcgggttcgaagatgcgttggcggccggcgtcagagaggtcgcggtg
tttgcagcggcaaccgaagggttctcccggcgtaacctcaattgctcgatcagcgaaagc
ctggagcgctttgcgcccatcatggcggcggcgcagatgcatggtgtgcagattcggggt
tatgtgtcgtgcgtgttgggctgcccttatgagggcagtgtctcgccgcagcaggtcgca
gccgtcgccaacgaactctacgcgatgggttgctatgaagtttcgctgggcgacaccatc
ggcaccggcacgccgggggccacgcgagcgctgttcaacgccgtctctgcgcagatcccg
cgaggcaagcttgccgggcacttccacgacacttacggtcaggcgctggtgaatatctac
gccagcctggaggaaggtatccaggtcttcgacagttccgtggcaggcctgggcggctgc
ccgtacgccaagggtgccagcggcaatgttgccactgaggacgtgcagtacatgttgcag
ggcatgggtattgaaaccggggtagatctggacaaggtcatcgccgcaggccagcgcatc
tgcggcgtactgcaacgcagcaatggctcgcgcgtggccagggcccggctgtctgcgtaa
DBGET
integrated database retrieval system