Pseudomonas amygdali: BKM19_015975
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Entry
BKM19_015975 CDS
T05354
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pamg
Pseudomonas amygdali
Pathway
pamg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BKM19_015975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pamg02000
]
BKM19_015975
Transporters [BR:
pamg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BKM19_015975
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AVB14914
UniProt:
A0AB35R4G5
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All DBs
Position
3242209..3243786
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AA seq
525 aa
AA seq
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MRRLTALAMAITISGSAWAATPPDTLVVARSIDDIASLDPAESFEITATNTLANIYQRLL
EPDRQNPASLVPALASRWKAGDDDKSLVFELRDGARFAAGNSVRPEDVIYSLSRVVKLNK
SPAFILGELGWTAENVDSFLTRVDDQHVKISWPAAVGSSFALSILSATPVGFIVDAVEVG
KHTKDADLGNGWLKNHSAGTGSYALRSYVPHEALVLQANPNAIKAPKLKTVILKNVTDPA
TRRLLVVQGDADLAFDLGADQFSALEKQKGVSVQRFPSSMIYYLAINSGSTQAPALKNPA
FWEAARWLVDYQGISKDLLKNQYSVHQAFLPEGVIGSLVDKPFKLDVDKAKAALKAGGIA
EGTKIELNVFNQPPYTDIAQALQASFAKAGIEISVRPLVESELLAKMRARDFQLIFTYWG
MDYLDPHSNASAFTYNVANGPKTIAWRTQWDIPQLSQETRTAAAERDPQKRVALYTDLQK
TVQQSSPFVVALQGQNQVAVHDGVQGVLQNITVSLPYFDQVSKSK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgtctgacagctctggctatggcaatcacaatcagcggttcagcctgggctgcg
acgcccccggatacgctggtggtggcgcgttcaatagacgacattgccagcctggacccc
gccgaaagttttgaaataaccgcgaccaacaccctggctaatatctatcagcgcttgctt
gagccagaccggcagaacccggccagtctggtgcctgccctggcatccagatggaaggcg
ggtgacgacgacaagagtctggttttcgaactgcgtgacggtgccagatttgccgcgggc
aacagtgttcgcccggaagacgtcatttactcactgagtcgcgtggtcaaactgaacaag
tcgcctgcattcatcctgggtgagttgggctggacggcggaaaacgtcgacagcttcctg
acccgggtggatgaccagcatgtgaagatttcctggccagcagcggtaggcagttcattt
gcgttgagcattctgtctgcgacgccagtgggcttcattgtcgacgcggtagaggtcggc
aagcatacgaaagacgctgatctgggcaacggctggctgaaaaatcattcagccggtacg
ggttcctatgcgctgcgcagctacgtgccgcacgaggcgctggtgcttcaggccaatcct
aatgccatcaaggcccccaagctgaaaacagtaatcctcaagaacgtcactgacccggca
acccgacgtctgttggtggtgcagggcgatgctgaccttgcgttcgatctgggtgcagac
cagttcagcgctctggaaaagcagaagggcgtcagtgtgcagcgattcccgtcctcaatg
atctattacctggccatcaacagtggcagcacgcaggcgcctgcactgaagaacccggcg
ttctgggaagctgctcgctggctggttgattatcagggcatttccaaagatctgttgaaa
aaccagtacagcgtccaccaggcattcctccctgagggcgtcatcggctcgctggtcgac
aaaccgttcaaactggacgtcgataaagccaaggccgccttaaaggcgggtggtattgcc
gaaggcacgaaaatcgaactcaatgtgttcaatcaacctccctacacagatattgcccag
gcgctgcaagccagttttgccaaagccggcatagagatttcagtgcgtccgctggtagaa
agcgagctactggcgaaaatgcgcgcccgggactttcagctgatcttcacctactggggg
atggattatctggatcctcactccaacgcgagcgccttcacttacaacgtcgccaacggt
ccgaaaaccatcgcctggcgcactcagtgggatatcccgcaactgagccaggaaacccgc
acggctgctgccgaacgtgacccgcaaaaacgtgttgcgctgtataccgacctgcaaaaa
actgtgcagcaaagctcgccatttgtcgtggcgctgcaaggtcagaaccaggtcgcggta
catgacggcgtgcaaggtgtgttacagaacatcaccgtttcgctgccgtattttgatcag
gtgagcaaaagcaagtga
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