Pseudomonas amygdali: BKM19_016160
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Entry
BKM19_016160 CDS
T05354
Name
(GenBank) ATP-dependent endonuclease
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
BKM19_016160
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Gene cluster
GFIT
Motif
Pfam:
AAA_15
AAA_21
OLD-like_TOPRIM
SMC_N
DUF2813
AAA_23
ABC_tran
AAA_30
AAA_29
AAA_27
Suc_Porlyase_C
Motif
Other DBs
NCBI-ProteinID:
AVB14941
UniProt:
A0AB35R4P0
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Position
complement(3282636..3284540)
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AA seq
634 aa
AA seq
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MYLRQLDVTGFKCFGQPFTIEFRDGLNVLVGENGAGKTGVISAVRQLFNDSESGKRIISE
RDFYRGFDVGALAAEKIQIQATFSDLDDQDSIAFEAWCGNHEEAKLTFEASNQESRGRFK
HHTYAGHEYTKAFESETLDYVHCIYLPPLRDAETKLREGRQSRLARLMKALCRKDLAAAR
KAQIPHPLEEHVGNFNRELSQNEKFAIKLANQRIADNLKAALGLNLSQGTMIQFSEVSFS
RIVEGLRLLYFPNLTEADTTQFRSLEENSLGYNNLLYIASILAELILEEDEDRGEETYLR
LLLIEEPEAHLHPQLQLRLLRHLKTVAEDRGIQVIITTHSTVISAAVSLDHLIHISNDGR
PTAVPLRLCGLPLQSRRFVDRWLDVTKSNLLFSKGALLVEGIAEAIVLPELARIVLCPYG
EGKNCLDDYGVSVINLGGIYFNYFMQLFCDVTGAQPGENVPIRCAGLTDNDPPKSVETVT
GQDGKEKAVPFLPHDGDCPVGDNPALELQGPIGQSQYSRLFAGKYKTFEYDIAMEGNNLR
CMSTTAASLWPVPDGDVVKGLKAAAKLDFAAMKSDERAHYAGDMLDRIEKKEIGKGLYAQ
AFADTLADLKEDFVVPEYIRLAILWACGLEDQAR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgcgccaattggatgtcaccgggttcaagtgctttggtcagccgtttaccatc
gaatttagagatgggcttaacgtacttgttggagaaaacggagccggcaagaccggtgtg
atcagcgccgtccgacagctcttcaacgactcggaatcgggtaagcggatcatcagcgaa
cgcgatttttaccgaggtttcgatgttggggctctcgctgctgaaaaaatccagatccag
gcaacgttttccgatcttgatgatcaagactccattgcgttcgaagcctggtgcggcaat
catgaggaagcgaagctgacttttgaggcgagcaatcaagagtcgcgcggcaggttcaag
caccatacttatgctgggcatgagtacaccaaggcttttgagtccgaaacgttagattac
gtccactgcatctacttgcctccattacgagacgccgagaccaagctgcgcgaaggtcgc
cagtcgcgccttgcacgactcatgaaagcgctatgtcgcaaggatcttgccgccgctaga
aaagctcaaatcccgcacccgctggaagagcacgttggcaatttcaaccgtgagctctca
cagaacgaaaaattcgcaatcaaactggcaaaccaacggatcgcagacaacctgaaagcg
gctctggggctgaatctttctcagggcaccatgattcagttttctgaggtgagcttctcc
cggattgtagaagggcttcggcttctgtacttccctaatctcaccgaggctgacaccact
cagtttcgatcgctggaggagaacagtcttgggtataacaatctcctgtatatcgcttca
attctcgctgaactgatactcgaagaggacgaggatagaggggaggagacttatttgcgg
ttgctgctgatcgaggaaccggaagctcatctccaccctcagttgcagcttcgccttttg
cggcatttgaaaaccgtggctgaggatcgcgggatacaggtgatcatcaccacccactcg
accgtaatctcagccgccgtttccctggatcaccttatccatatttccaatgatggaagg
cctaccgcggtacccctgagactgtgcgggctcccccttcagagtcgccgtttcgtggat
cgatggttggatgtaacgaagtcaaacctattgttctccaaaggcgcgctgttggtcgaa
ggaattgccgaagcaatcgtgttacccgaacttgctcgcatcgtcttgtgcccttatggg
gaggggaagaattgcctagacgattacggagtctcggtgatcaaccttggtggcatctac
tttaactacttcatgcaactgttttgcgatgtcaccggagctcagccaggtgagaatgtc
cccatcagatgcgcagggctcacagacaacgacccaccgaaatctgtcgagactgttaca
ggccaagacggcaaggagaaagccgtcccattccttccccatgatggtgactgccctgta
ggcgacaacccggcgctggagctacaagggccgatcggccagtcgcagtactcaaggttg
ttcgcaggcaagtacaaaacatttgaatatgacatcgcgatggaagggaacaacctcagg
tgtatgtccacgactgcggccagtctctggccggtacccgatggtgatgtggtaaagggc
ttaaaggcggctgcaaaacttgattttgcggccatgaagtcggacgagcgggcgcattat
gctggcgatatgcttgaccggatcgagaaaaaagagatcggcaagggactgtatgcccag
gcatttgcagatacgctggctgaccttaaggaagattttgtggtgccagagtacattcgg
ctggccatcctctgggcctgcgggttagaggatcaagctcgatga
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